RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TMPRSS7Q7RTY8 843 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 HAPLN4Q86UW8 402 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 RAB40CQ96S21 281 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
COL6A1-206ENST00000498614 CD300LBA8K4G0 201 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 SS18L1O75177 396 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-206ENST00000498614 CNOT4O95628 575 aaKnown RBP13.88□□□□□ -0.19
COL6A1-206ENST00000498614 NDUFB7P17568 137 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 CLN3Q13286 438 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 MKXQ8IYA7 352 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 SAXO1Q8IYX7 474 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 ZNF525Q8N782 197 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 POM121Q96HA1 1249 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 HIST1H2AAQ96QV6 131 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 ARHGAP21Q5T5U3 1957 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 MGAQ8IWI9 3026 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 BOD1L1Q8NFC6 3051 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 IFNA10P01566 189 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 SERPINE2P07093 398 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 ARR3P36575 388 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 PLP2Q04941 152 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 WDR25Q64LD2 544 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-206ENST00000498614 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 OR5R1Q8NH85 324 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
COL6A1-206ENST00000498614 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
COL6A1-206ENST00000498614 SLC31A2O15432 143 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 SP1P08047 785 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 CTXN2P0C2S0 81 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 SELLP14151 372 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 WNT5AP41221 380 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 ZNF324BQ6AW86 544 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-206ENST00000498614 BEND4Q6ZU67 534 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 VASH2Q86V25 355 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 TMEM183AQ8IXX5 376 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 MRPL30Q8TCC3 161 aaKnown RBP13.87□□□□□ -0.19
COL6A1-206ENST00000498614 RBKSQ9H477 322 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 ASCL3Q9NQ33 180 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 CACNG5Q9UF02 275 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 HS3ST1O14792 307 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 IGKV1-39P01597 117 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 AMBPP02760 352 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 IGKV1D-39P04432 117 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 PAX1P15863 534 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 MDH2P40926 338 aaKnown RBP13.87□□□□□ -0.19
COL6A1-206ENST00000498614 COL10A1Q03692 680 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 FOXC1Q12948 553 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 OR5A2Q8NGI9 324 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 P2RX4Q99571 388 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 CTDSP1Q9GZU7 261 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 DEFB127Q9H1M4 99 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 PLK3Q9H4B4 646 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 PSENENQ9NZ42 101 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 GAB2Q9UQC2 676 aa13.87□□□□□ -0.19
COL6A1-206ENST00000498614 ELLP55199 621 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-206ENST00000498614 TLE1Q04724 770 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 JOSD1Q15040 202 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-206ENST00000498614 ADIRFQ15847 76 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 SPATA46Q5T0L3 261 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 ATP1A1-AS1Q5TC04 95 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 MRGPRGQ86SM5 289 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 NECAP1Q8NC96 275 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 OR5P3Q8WZ94 311 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 RDH5Q92781 318 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 PSMG3Q9BT73 122 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-206ENST00000498614 ERRFI1Q9UJM3 462 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-206ENST00000498614 OR2W1Q9Y3N9 320 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 ESPL1Q14674 2120 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 CEP295Q9C0D2 2601 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 MAP1LC3B2A6NCE7 125 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 ANKRD30BLA7E2S9 258 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 SYNGR2O43760 224 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 GZMBP10144 247 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 SLC25A6P12236 298 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 APLNRP35414 380 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 LRRC75BQ2VPJ9 315 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 C16orf82Q7Z2V1 217 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-206ENST00000498614 MAP1LC3BQ9GZQ8 125 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 SRD5A3Q9H8P0 318 aa13.86□□□□□ -0.19
COL6A1-206ENST00000498614 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 PFN1P07737 140 aaKnown RBP13.85□□□□□ -0.19
COL6A1-206ENST00000498614 KLF13Q9Y2Y9 288 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-206ENST00000498614 SPENQ96T58 3664 aaKnown RBP13.85□□□□□ -0.19
COL6A1-206ENST00000498614 DVL1O14640 695 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 IL18BPO95998 194 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 IGKV1-5P01602 117 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 CA6P23280 308 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 S100GP29377 79 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 TAS2R60P59551 318 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 Q3ZCU0 254 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 NCR3LG1Q68D85 454 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 OR1K1Q8NGR3 316 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 OR1P1Q8NH06 330 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 RNF150Q9ULK6 438 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 LAMP3Q9UQV4 416 aa13.85□□□□□ -0.19
COL6A1-206ENST00000498614 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms