RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 MAFIPQ8WZ33 124 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 OCSTAMPQ9BR26 566 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 Q9N2K0 584 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 GNG12Q9UBI6 72 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 MRPS7Q9Y2R9 242 aaKnown RBP12.24□□□□□ -0.45
NUP50-219ENST00000497960 A0A1W2PPI3 338 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 HSD17B6O14756 317 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 GAPDHP04406 335 aaKnown RBP12.23□□□□□ -0.45
NUP50-219ENST00000497960 SNRNP70P08621 437 aaKnown RBP12.23□□□□□ -0.45
NUP50-219ENST00000497960 CD28P10747 220 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 PTHLHP12272 177 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 LOXL3P58215 753 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 DEFA6Q01524 100 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 KIR2DS1Q14954 304 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 Q3ZCU0 254 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 HIST2H2BDQ6DRA6 164 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 CNIH2Q6PI25 160 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 SNX29P2Q8IUI4 249 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 LINC00311Q8N616 119 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 GALMQ96C23 342 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 NXF2Q9GZY0 626 aaKnown RBP12.23□□□□□ -0.45
NUP50-219ENST00000497960 IFT46Q9NQC8 304 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 ZNF230Q9UIE0 474 aaPredicted RBP12.23□□□□□ -0.45
NUP50-219ENST00000497960 MOB4Q9Y3A3 225 aa12.23□□□□□ -0.45
NUP50-219ENST00000497960 NOTCH3Q9UM47 2321 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 NOTCH1P46531 2555 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 A6NHS1 94 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 LPLP06858 475 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 TMEM11P17152 192 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 S100A5P33763 92 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
NUP50-219ENST00000497960 DIAPH2-AS1Q14236 149 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 FBLN7Q53RD9 439 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 CENPVQ7Z7K6 275 aaPredicted RBP12.22□□□□□ -0.45
NUP50-219ENST00000497960 MOB3BQ86TA1 216 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 OR10V1Q8NGI7 309 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 WIPF2Q8TF74 440 aaPredicted RBP12.22□□□□□ -0.45
NUP50-219ENST00000497960 DIRAS2Q96HU8 199 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 JPT1Q9UK76 154 aa12.22□□□□□ -0.45
NUP50-219ENST00000497960 IGHV1-3A0A0C4DH29 117 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 MEIS3P1A6NDR6 274 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 TRDCB7Z8K6 153 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 FABP7O15540 132 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 WIPF1O43516 503 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 SSX5O60225 188 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 IGKV1D-33P01593 117 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 IGKV1-33P01594 117 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 CBX5P45973 191 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 REG1BP48304 166 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 HNF4GQ14541 408 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 GNMTQ14749 295 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 RNASE12Q5GAN4 147 aaKnown RBP12.21□□□□□ -0.45
NUP50-219ENST00000497960 C5orf24Q7Z6I8 188 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 LYG1Q8N1E2 194 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 CITED2Q99967 270 aaPredicted RBP12.21□□□□□ -0.45
NUP50-219ENST00000497960 ST6GALNAC5Q9BVH7 336 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 A3GALT2U3KPV4 340 aa12.21□□□□□ -0.45
NUP50-219ENST00000497960 SH2D7A6NKC9 451 aaPredicted RBP12.2□□□□□ -0.46
NUP50-219ENST00000497960 HSPA12AO43301 675 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OPN1MWP04001 364 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 AMY1AP04745 511 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 AMY2AP04746 511 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 SCTP09683 121 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 PRSS3P35030 304 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 PPP1CCP36873 323 aaKnown RBP12.2□□□□□ -0.46
NUP50-219ENST00000497960 HTD2P86397 168 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 IL18Q14116 193 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 STEAP3Q658P3 488 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
NUP50-219ENST00000497960 SLC25A48Q6ZT89 311 aaKnown RBP12.2□□□□□ -0.46
NUP50-219ENST00000497960 OR4F17Q8NGA8 305 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OR52L2PQ8NGH6 319 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OR4F4Q96R69 305 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 OR2S2Q9NQN1 319 aa12.2□□□□□ -0.46
NUP50-219ENST00000497960 VWFP04275 2813 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 FGF16O43320 207 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 TXNL1O43396 289 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 KCNAB3O43448 404 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 RGS11O94810 467 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 HLA-DQB1P01920 261 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 FCER2P06734 321 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 ARPC4P59998 168 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 SRSF7Q16629 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
NUP50-219ENST00000497960 Q6ZS49 121 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 GVQW1Q8N7I0 195 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 BEST4Q8NFU0 473 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 R3HDM4Q96D70 268 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms