RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ZNF589Q86UQ0 364 aaPredicted RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 PHF13Q86YI8 300 aaPredicted RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF676Q8N7Q3 588 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 WDSUB1Q8N9V3 476 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 OR2Z1Q8NG97 314 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 OR11H7Q8NGC8 314 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 OR1N2Q8NGR9 330 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 CCL17Q92583 94 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 RDH5Q92781 318 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 MARC2Q969Z3 335 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TM4SF18Q96CE8 201 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 HAUS1Q96CS2 278 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 GALNT14Q96FL9 552 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 FMC1Q96HJ9 113 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 SPACA5Q96QH8 159 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF184Q99676 751 aaPredicted RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ARHGDIGQ99819 225 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 SYT15Q9BQS2 421 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 RTBDNQ9BSG5 229 aaPredicted RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 SUCNR1Q9BXA5 334 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TRIM15Q9C019 465 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TPK1Q9H3S4 243 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF430Q9H8G1 570 aaPredicted RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 PANK3Q9H999 370 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 SLCO1B3Q9NPD5 702 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TAS2R5Q9NYW4 299 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 CACNG5Q9UF02 275 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 HHLA2Q9UM44 414 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 PRELID3BQ9Y3B1 194 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 LCTP09848 1927 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 CADP27708 2225 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 RP1P56715 2156 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 A0A087WWV3 80 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 IGHV3-35A0A0C4DH35 117 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TRIM49D1C9J1S8 452 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 LAD1O00515 517 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 PLIN3O60664 434 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 GCM2O75603 506 aaPredicted RBP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 DHFRP00374 187 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 IFNA21P01568 189 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 ICAM2P13598 275 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 CXCL2P19875 107 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 PSMB9P28065 219 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 SERPINB1P30740 379 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 MPIP34949 423 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 PRSS3P35030 304 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 RPL5P46777 297 aaKnown RBP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TAS2R41P59536 307 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 NAA20P61599 178 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 IFITM2Q01629 132 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TCP10Q12799 353 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 RUNX3Q13761 415 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 EDDM3AQ14507 147 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 POU6F1Q14863 301 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TGIF1Q15583 401 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TMEM97Q5BJF2 176 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 AVPI1Q5T686 147 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TSPO2Q5TGU0 170 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 GSG1LQ6UXU4 331 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 FBXW12Q6X9E4 464 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 DGAT2L6Q6ZPD8 337 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 SLC36A1Q7Z2H8 476 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 LINC00337Q8N6G1 96 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF485Q8NCK3 441 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 OR4P4Q8NGL7 312 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 OR1L8Q8NGR8 309 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 OR2G3Q8NGZ4 309 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 EEF1AKMT1Q8WVE0 214 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TAMM41Q96BW9 452 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 SEH1LQ96EE3 360 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 CPNE2Q96FN4 548 aaPredicted RBP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 SMARCD1Q96GM5 515 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 QKIQ96PU8 341 aaKnown RBP eCLIP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 SIGMAR1Q99720 223 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 CHCHD5Q9BSY4 110 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 MROQ9BYG7 248 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 SLC25A39Q9BZJ4 359 aaPredicted RBP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 CHST5Q9GZS9 411 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 FAM107BQ9H098 131 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 TXNIPQ9H3M7 391 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 ISG20L2Q9H9L3 353 aaKnown RBP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 LRTM1Q9HBL6 345 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 DDX19AQ9NUU7 478 aaKnown RBP2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 ARMC1Q9NVT9 282 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 CTSZQ9UBR2 303 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 DKKL1Q9UK85 242 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 ERGIC3Q9Y282 383 aa2.7□□□□□ -1.98
EXOSC3-208ENST00000496910 CLUHO75153 1309 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 KMT2AQ03164 3969 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 IGKV1-27A0A075B6S5 117 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 CIB4A0PJX0 185 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF729A6NN14 1252 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 A8MXK9 166 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 TCAPO15273 167 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 SLC31A2O15432 143 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 TBL1XO60907 577 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 LYPLA1O75608 230 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OR2B3O76000 313 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 KBTBD11O94819 623 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms