RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 MICU1Q9BPX6 476 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 TACC2O95359 2948 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 AGPAT2O15120 278 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 SYNGR3O43761 229 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ANGPTL7O43827 346 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 CSN2P05814 226 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 CST2P09228 141 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ACHEP22303 614 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF93P35789 620 aaPredicted RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 GLP1RP43220 463 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 RRADP55042 308 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 F2RL1P55085 397 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF92Q03936 586 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 FOXF2Q12947 444 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 RAB32Q13637 225 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 CD276Q5ZPR3 534 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 OR4A47Q6IF82 309 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 FAM166AQ6J272 317 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM182Q6ZP80 229 aaPredicted RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF101Q8IZC7 436 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 OR5AS1Q8N127 324 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 GABRG1Q8N1C3 465 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 GVQW1Q8N7I0 195 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 CASTOR1Q8WTX7 329 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 PIK3IP1Q96FE7 263 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 SLC35E1Q96K37 410 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 DUX5Q96PT3 197 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MS4A5Q9H3V2 200 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF71Q9NQZ8 489 aaPredicted RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MCTS1Q9ULC4 181 aaKnown RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 PIGLQ9Y2B2 252 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 UFC1Q9Y3C8 167 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MED12LQ86YW9 2145 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 C5orf49A4QMS7 147 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GGT3PA6NGU5 568 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR11H12B2RN74 326 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 H0Y980 276 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 DVL1O14640 695 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 PDE6DO43924 150 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 LYZL6O75951 148 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 SYNGR4O95473 234 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ALDOBP05062 364 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF20P17024 532 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 FPR2P25090 351 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 PMPCAQ10713 525 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 SPIN3Q5JUX0 258 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM268Q5VZI3 342 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GLT8D1Q68CQ7 371 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 AWAT2Q6E213 333 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR2A2Q6IF42 318 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 TEX38Q6PEX7 206 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CRIP3Q6Q6R5 217 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 TMED4Q7Z7H5 227 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 LYPD6Q86Y78 171 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 C1QL4Q86Z23 238 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CNEP1R1Q8N9A8 125 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM178AQ8NBL3 297 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR11H1Q8NG94 326 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR5D14Q8NGL3 314 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR10R2Q8NGX6 335 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR11H2Q8NH07 326 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 SMIM4Q8WVI0 70 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GALNT14Q96FL9 552 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GPER1Q99527 375 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ACTR3CQ9C0K3 210 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR2H1Q9GZK4 316 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ZDHHC11Q9H8X9 412 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ELL3Q9HB65 397 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 PTPRBP23467 1997 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 MAP1AP78559 2803 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 SLC22A20A6NK97 555 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF724A8MTY0 619 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 RAD51DO75771 328 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CELA3BP08861 270 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GNB3P16520 340 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CRYGSP22914 178 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CFHR2P36980 270 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CXADRP78310 365 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 HOXA4Q00056 320 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GTF3C1Q12789 2109 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 MRPL23Q16540 153 aaKnown RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ANKRD16Q6P6B7 361 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 GLIPR1L1Q6UWM5 242 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 H1FOOQ8IZA3 346 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CHST4Q8NCG5 386 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR1N2Q8NGR9 330 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR56B4Q8NH76 319 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 OR1F12Q8NHA8 337 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 NUDCD2Q8WVJ2 157 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 DYRK2Q92630 601 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 ISOC2Q96AB3 205 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 PNPLA2Q96AD5 504 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 APH1AQ96BI3 265 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 CHRDL1Q9BU40 450 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 DPAGT1Q9H3H5 408 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 RAB18Q9NP72 206 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 AURKAIP1Q9NWT8 199 aaPredicted RBP5.25□□□□□ -1.57
SSBP1-213ENST00000496622 PSG8Q9UQ74 426 aa5.25□□□□□ -1.57
SSBP1-213ENST00000496622 INTS1Q8N201 2190 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms