RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 NANOS3P60323 173 aaKnown RBP3.3□□□□□ -1.88
VPS52-222ENST00000495981 ACTR3P61158 418 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 RPL31P62899 125 aaKnown RBP3.3□□□□□ -1.88
VPS52-222ENST00000495981 GNG3P63215 75 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 HAGHQ16775 308 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 SMIM21Q3B7S5 101 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 TMEM42Q69YG0 159 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 GLYATQ6IB77 296 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 C10orf99Q6UWK7 81 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 ACP7Q6ZNF0 438 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 Q6ZSR3 168 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 CATSPERDQ86XM0 798 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 PGAM4Q8N0Y7 254 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 FTMTQ8N4E7 242 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 STPG4Q8N801 248 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 WFDC9Q8NEX5 89 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 BBS1Q8NFJ9 593 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 OR2T33Q8NG76 320 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 OR4F17Q8NGA8 305 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 OR11H6Q8NGC7 330 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 OR10G8Q8NGN5 311 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 ZNF486Q96H40 463 aaPredicted RBP3.3□□□□□ -1.88
VPS52-222ENST00000495981 MED30Q96HR3 178 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 OR4F4Q96R69 305 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 OR8B4Q96RC9 309 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 NIPSNAP1Q9BPW8 284 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 TSSK6Q9BXA6 273 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 SP140LQ9H930 580 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 NRN1Q9NPD7 142 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 TAS2R1Q9NYW7 299 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 USE1Q9NZ43 259 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 BAIAP2Q9UQB8 552 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 GSTK1Q9Y2Q3 226 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 TBL2Q9Y4P3 447 aaKnown RBP3.3□□□□□ -1.88
VPS52-222ENST00000495981 SELENOKQ9Y6D0 94 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 MYCBP2O75592 4640 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 A0A0A6YYD4 124 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 A0A1B0GUV1 79 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 PQLC2LA1A4F0 135 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 MEX3AA1L020 520 aaKnown RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 RFPL4AA6NLU0 287 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 RIIAD1A6NNX1 92 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 RFPL4AL1F8VTS6 287 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 CCDC22O60826 627 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 CCNB2O95067 398 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 SERPINA3P01011 423 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 TTRP02766 147 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 ALPLP05186 524 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 H2BFMP0C1H6 154 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 IGHV1-8P0DP01 117 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 PIPP12273 146 aaPredicted RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 ALOX5APP20292 161 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 CCL1P22362 96 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 IFNGR2P38484 337 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 VDAC2P45880 294 aaPredicted RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 BLVRAP53004 296 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 ERVK11-1P61568 191 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 BLCAPP62952 87 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 ARL16Q0P5N6 197 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 SNCBQ16143 134 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 TATDN3Q17R31 274 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 CEACAM21Q3KPI0 293 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 PLCXD3Q63HM9 321 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 LCN8Q6JVE9 175 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 HAGHLQ6PII5 290 aaPredicted RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 BAIAP2L2Q6UXY1 529 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 SPATA24Q86W54 205 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 CALHM1Q8IU99 346 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 LINC00471Q8N535 108 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 ZNF561Q8N587 486 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 OR4M1Q8NGD0 313 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 OR4P4Q8NGL7 312 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 RPS4Y2Q8TD47 263 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 PIGCQ92535 297 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 DLX4Q92988 240 aaPredicted RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 COQ2Q96H96 371 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 RNF170Q96K19 258 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 RBM14Q96PK6 669 aaKnown RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 TEAD3Q99594 435 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 NIPAL2Q9H841 368 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 EFCAB1Q9HAE3 211 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 INPP5EQ9NRR6 644 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 NUFIP1Q9UHK0 495 aaKnown RBP3.29□□□□□ -1.88
VPS52-222ENST00000495981 COPS3Q9UNS2 423 aa3.29□□□□□ -1.88
VPS52-222ENST00000495981 DNAH5Q8TE73 4624 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 IGKV1-27A0A075B6S5 117 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 IGHV2-26A0A0B4J1V2 119 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 METTL21EPA6NDL7 271 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 K7N7A8 449 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 M0R129 80 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 TNFRSF11BO00300 401 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 NOS1APO75052 506 aaPredicted RBP3.28□□□□□ -1.88
VPS52-222ENST00000495981 DHRS3O75911 302 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 KRT36O76013 467 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 IFNGP01579 166 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 APOC1P02654 83 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 ARG1P05089 322 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms