RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PLGRKTQ9HBL7 147 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 NEK6Q9HC98 313 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 SIGLEC9Q9Y336 463 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 V9GY05 133 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 KMT2CQ8NEZ4 4911 aaKnown RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 IGHV3OR15-7A0A075B7D8 119 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 TRAV38-1A0A0B4J264 116 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 A0A1B0GW55 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 A0A1W2PRD5 423 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 A0A1W2PRF3 423 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 A0A1W2PRM7 423 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 PQLC2LA1A4F0 135 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 OOEPA6NGQ2 149 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 CDIPTO14735 213 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 NDUFA2O43678 99 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 ANGPTL7O43827 346 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 PTBP3O95758 552 aaKnown RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 ECDO95905 644 aaPredicted RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 LHBP01229 141 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 OPN1MWP04001 364 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L2P0CJ85 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L3P0CJ86 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L4P0CJ87 422 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L5P0CJ88 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L6P0CJ89 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L7P0CJ90 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 OPN1MW2P0DN77 364 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 OPN1MW3P0DN78 364 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 CALCBP10092 127 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 PTGFRP43088 359 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 HAAOP46952 286 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 RORCP51449 518 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DLX1P56177 255 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 CLDN12P56749 244 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 GMFBP60983 142 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 GNG3P63215 75 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 P2RY14Q15391 338 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 CNPY1Q3B7I2 92 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 TEX38Q6PEX7 206 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4L9Q6RFH8 374 aaPredicted RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 VMO1Q7Z5L0 202 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 ZNF573Q86YE8 665 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 CALHM1Q8IU99 346 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 CDH26Q8IXH8 852 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 C11orf53Q8IXP5 236 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 OR5D18Q8NGL1 313 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DYNC2LI1Q8TCX1 351 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 HPSE2Q8WWQ2 592 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 S100A13Q99584 98 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 BARHL1Q9BZE3 327 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 OR51I2Q9H344 312 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 ELL3Q9HB65 397 aaPredicted RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.14□□□□□ -1.59
VIM-207ENST00000495528 C1orf123Q9NWV4 160 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 ZNRD1Q9P1U0 126 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 KAAG1Q9UBP8 84 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DUX4Q9UBX2 424 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 DAPK2Q9UIK4 370 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 RPUSD1Q9UJJ7 312 aaKnown RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 VPREB3Q9UKI3 123 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 NOP16Q9Y3C1 178 aaKnown RBP5.14□□□□□ -1.59
VIM-207ENST00000495528 KPTNQ9Y664 436 aa5.14□□□□□ -1.59
VIM-207ENST00000495528 A0A0B4J203 849 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 OR5B21A6NL26 309 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 IFITM5A6NNB3 132 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 RNASEK-C17orf49H0YIS7 233 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 ZNF701M0R085 212 aaPredicted RBP5.13□□□□□ -1.59
VIM-207ENST00000495528 SLC17A2O00624 439 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 SYNGR1O43759 233 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 CYB5AP00167 134 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 FBP1P09467 338 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 CD37P11049 281 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 HTR2CP28335 458 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 SOX6P35712 828 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 OR3A4PP47883 348 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 NPBWR2P48146 333 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 POU3F4P49335 361 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 MZT1Q08AG7 82 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 PDZK1IP1Q13113 114 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 HERPUD1Q15011 391 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 RAB11BQ15907 218 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 DGUOKQ16854 277 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 C1orf100Q5SVJ3 147 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 TEX36Q5VZQ5 186 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 HAGHLQ6PII5 290 aaPredicted RBP5.13□□□□□ -1.59
VIM-207ENST00000495528 GLIPR1L1Q6UWM5 242 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 SLC25A26Q70HW3 274 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 WDR86Q86TI4 376 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 MKXQ8IYA7 352 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 BATF2Q8N1L9 274 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 PNKDQ8N490 385 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 STPG4Q8N801 248 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 LY6G5BQ8NDX9 201 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 OR51D1Q8NGF3 324 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 OR4D6Q8NGJ1 314 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 OR10K1Q8NGX5 313 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 ZNF671Q8TAW3 534 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 MRAPQ8TCY5 172 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 TNFAIP8L1Q8WVP5 186 aa5.13□□□□□ -1.59
VIM-207ENST00000495528 SLC25A46Q96AG3 418 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms