RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 T-ENOLP0DO92 83 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 S100PP25815 95 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 OR10J1P30954 320 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 MDH2P40926 338 aaKnown RBP4.97□□□□□ -1.61
SNX13-210ENST00000494402 INPP1P49441 399 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 DIO3P55073 304 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 HERVK_113P63121 156 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 C12orf74Q32Q52 190 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 PLPPR5Q32ZL2 321 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 CEMP1Q6PRD7 247 aaPredicted RBP4.97□□□□□ -1.61
SNX13-210ENST00000494402 LYPD2Q6UXB3 125 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 OR2T27Q8NH04 317 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 OR1L1Q8NH94 360 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 C1orf54Q8WWF1 131 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 FRZBQ92765 325 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 GALMQ96C23 342 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 C18orf15Q96N68 181 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 TSPAN32Q96QS1 320 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 LYSMD1Q96S90 227 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 SERPINI1Q99574 410 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 PAXXQ9BUH6 204 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 CHST6Q9GZX3 395 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 TMEM126AQ9H061 195 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 GTSF1LQ9H1H1 148 aa4.97□□□□□ -1.61
SNX13-210ENST00000494402 DYSFO75923 2080 aa4.96□□□□□ -1.61
SNX13-210ENST00000494402 BORCS7-ASMTA0A0B4J1R7 106 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 TMEM72A0PK05 275 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 TRAPPC2LH3BP13 241 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 ZNF207O43670 478 aaKnown RBP4.96□□□□□ -1.62
SNX13-210ENST00000494402 ORM2P19652 201 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 PSMD8P48556 350 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 SERPINB10P48595 397 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 THBS3P49746 956 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 EMP1P54849 157 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 GABARAPL2P60520 117 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 RPS20P60866 119 aaKnown RBP4.96□□□□□ -1.62
SNX13-210ENST00000494402 ELOCQ15369 112 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 LINC00303Q3SY05 128 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 TIMM50Q3ZCQ8 353 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 FA2HQ7L5A8 372 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 ZNF615Q8N8J6 731 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 CCDC115Q96NT0 180 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 COMMD5Q9GZQ3 224 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 CDC42EP4Q9H3Q1 356 aaKnown RBP4.96□□□□□ -1.62
SNX13-210ENST00000494402 PLEKHF2Q9H8W4 249 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 SCRT2Q9NQ03 307 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 ZNF581Q9P0T4 197 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 DHCR7Q9UBM7 475 aaKnown RBP4.96□□□□□ -1.62
SNX13-210ENST00000494402 ANAPC10Q9UM13 185 aa4.96□□□□□ -1.62
SNX13-210ENST00000494402 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
SNX13-210ENST00000494402 SIGLEC1Q9BZZ2 1709 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 hCG_1818297A0A087WSY0 165 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 IGKV6D-21A0A0A0MT36 114 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 TMED7-TICAM2A0A0A6YYA0 188 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 A8MT66 165 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 B4DEV8 164 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 C5orf58C9J3I9 102 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 ATP6V1G2-DDX39BF2Z307 99 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 H3BSA7 217 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 EIF1BO60739 113 aaKnown RBP4.95□□□□□ -1.62
SNX13-210ENST00000494402 DEDDO75618 318 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 FSHBP01225 129 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 PSG2P11465 335 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 GABRA3P34903 492 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 EIF1P41567 113 aaKnown RBP4.95□□□□□ -1.62
SNX13-210ENST00000494402 DEFA1P59665 94 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 TIMM10P62072 90 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 RPS28P62857 69 aaKnown RBP4.95□□□□□ -1.62
SNX13-210ENST00000494402 CAV1Q03135 178 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 KRTAP27-1Q3LI81 207 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 ZNF429Q86V71 674 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 LRRC28Q86X40 367 aaPredicted RBP4.95□□□□□ -1.62
SNX13-210ENST00000494402 ZNF645Q8N7E2 425 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 YIPF7Q8N8F6 280 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 GTSF1Q8WW33 167 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 DCUN1D4Q92564 292 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 KLK6Q92876 244 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 PLEKHB2Q96CS7 222 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 STARD4Q96DR4 205 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 REEP6Q96HR9 211 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 CAMK2N2Q96S95 79 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 PBOV1Q9GZY1 135 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 MED28Q9H204 178 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 ZNF556Q9HAH1 456 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 DEC1Q9P2X7 70 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 NOS1P29475 1434 aa4.95□□□□□ -1.62
SNX13-210ENST00000494402 A0A087WX48 190 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 IGHV1-69-2A0A0G2JMI3 117 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 PIRO00625 290 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 TPST1O60507 370 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 APOMO95445 188 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 DBIP07108 87 aaKnown RBP4.94□□□□□ -1.62
SNX13-210ENST00000494402 CRISP2P16562 243 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 CGB2Q6NT52 195 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 GUSBP11Q6P575 273 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 AGTRAPQ6RW13 159 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 TCF23Q7RTU1 214 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 SLC25A42Q86VD7 318 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms