RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TMEM89A2RUT3 159 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 SAA2P0DJI9 122 aaPredicted RBP10.02□□□□□ -0.81
TRA2A-209ENST00000494255 CD24P25063 80 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 RAG2P55895 527 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 FOXL1Q12952 345 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 HES1Q14469 280 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 SNX29P2Q8IUI4 249 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 GVQW1Q8N7I0 195 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 OR4F5Q8NH21 305 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 C15orf40Q8WUR7 153 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 AKR1E2Q96JD6 320 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 NPFFR1Q9GZQ6 430 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 C6orf62Q9GZU0 229 aaPredicted RBP10.02□□□□□ -0.81
TRA2A-209ENST00000494255 TOLLIPQ9H0E2 274 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 IFI27L2Q9H2X8 130 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 C1RLQ9NZP8 487 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 EXTL2Q9UBQ6 330 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 MEIS3P1A6NDR6 274 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 CTDSP2O14595 271 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 CHST1O43916 411 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 NDUFA7O95182 113 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 HLA-DQB1P01920 261 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 SNRNP70P08621 437 aaKnown RBP10.01□□□□□ -0.81
TRA2A-209ENST00000494255 OR3A3P47888 321 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 FAM71F2Q6NXP2 309 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 CCBE1Q6UXH8 406 aaPredicted RBP10.01□□□□□ -0.81
TRA2A-209ENST00000494255 C16orf82Q7Z2V1 217 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 LAX1Q8IWV1 398 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 ODF3L1Q8IXM7 274 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 H1FOOQ8IZA3 346 aaPredicted RBP10.01□□□□□ -0.81
TRA2A-209ENST00000494255 MCFD2Q8NI22 146 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 CFHR4Q92496 578 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 DCUN1D5Q9BTE7 237 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 SLIRPQ9GZT3 109 aaKnown RBP10.01□□□□□ -0.81
TRA2A-209ENST00000494255 MIXL1Q9H2W2 232 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 SCPEP1Q9HB40 452 aa10.01□□□□□ -0.81
TRA2A-209ENST00000494255 IGHV3-72A0A0B4J1Y9 119 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 FAM90A9PA6NNJ1 464 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 TPPPO94811 219 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 FCER2P06734 321 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 CD1BP29016 333 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 GPR12P47775 334 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 ZNF833PQ6ZTB9 187 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 OR4C13Q8NGP0 309 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 AGMATQ9BSE5 352 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 SLC25A33Q9BSK2 321 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 NECAP2Q9NVZ3 263 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 RNF150Q9ULK6 438 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 ATRQ13535 2644 aa10□□□□□ -0.81
TRA2A-209ENST00000494255 SULT1C2O00338 296 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR2F2O95006 317 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 IGKV1D-33P01593 117 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 IGKV1-33P01594 117 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR8U9P0C7N5 309 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 TMEM11P17152 192 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 HABP2Q14520 560 aaPredicted RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 RPL39P5Q59GN2 51 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 C12orf54Q6X4T0 127 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR2T10Q8NGZ9 312 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR8U1Q8NH10 309 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 GPX8Q8TED1 209 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 TAF15Q92804 592 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 DGCR14Q96DF8 476 aaKnown RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 DIRAS2Q96HU8 199 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 RBM14Q96PK6 669 aaKnown RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 MRPL20Q9BYC9 149 aaKnown RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR2D2Q9H210 308 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 BEX1Q9HBH7 125 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 A0A1B0GUS0 222 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 M0QZK8 103 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 NFYAP23511 347 aaPredicted RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 LUMP51884 338 aaPredicted RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 TAS2R46P59540 309 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 RELBQ01201 579 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 LSAMPQ13449 338 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 CDK10Q15131 360 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 Q6ZSV7 163 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR5AP2Q8NGF4 316 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 SNAPC3Q92966 411 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 NABP2Q9BQ15 211 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 RABL2AQ9UBK7 228 aaPredicted RBP9.99□□□□□ -0.81
TRA2A-209ENST00000494255 ANAPC10Q9UM13 185 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 RABL2BQ9UNT1 228 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 OR2W1Q9Y3N9 320 aa9.99□□□□□ -0.81
TRA2A-209ENST00000494255 FBN1P35555 2871 aaKnown RBP9.98□□□□□ -0.81
TRA2A-209ENST00000494255 DPPA5A6NC42 116 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 TSPAN9O75954 239 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 MOSP00540 346 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 OR5H8P0DN80 308 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 COMPP49747 757 aaPredicted RBP9.98□□□□□ -0.81
TRA2A-209ENST00000494255 HNF4GQ14541 408 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 AWAT1Q58HT5 328 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 ARSJQ5FYB0 599 aaPredicted RBP9.98□□□□□ -0.81
TRA2A-209ENST00000494255 OR5H2Q8NGV7 314 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
TRA2A-209ENST00000494255 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms