RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SLC13A5Q86YT5 568 aaPredicted RBP3.44□□□□□ -1.86
SMC2-205ENST00000493955 FUNDC1Q8IVP5 155 aa3.44□□□□□ -1.86
SMC2-205ENST00000493955 OR4P4Q8NGL7 312 aa3.44□□□□□ -1.86
SMC2-205ENST00000493955 ZNF426Q9BUY5 554 aa3.44□□□□□ -1.86
SMC2-205ENST00000493955 VSIRQ9H7M9 311 aa3.44□□□□□ -1.86
SMC2-205ENST00000493955 IMP3Q9NV31 184 aaKnown RBP3.44□□□□□ -1.86
SMC2-205ENST00000493955 IGHV1-45A0A0A0MS14 117 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 IGHV3-21A0A0B4J1V1 117 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 TMEM250H0YL14 139 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 ZNF3P17036 446 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 CELP19835 753 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 ACTR1BP42025 376 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 ZNF235Q14590 738 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 EXOC3L4Q17RC7 722 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 PLCZ1Q86YW0 608 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 GPR22Q99680 433 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 TXNIPQ9H3M7 391 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 RTL9Q8NET4 1388 aa3.43□□□□□ -1.86
SMC2-205ENST00000493955 IBTKQ9P2D0 1353 aaPredicted RBP3.43□□□□□ -1.86
SMC2-205ENST00000493955 PDE4DIPQ5VU43 2346 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 A0A1W2PQ67 120 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 OR6C70A6NIJ9 312 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 LEUTXA8MZ59 168 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 FTCDNL1E5RQL4 147 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 F5H5P2 479 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 PSIP1O75475 530 aaKnown RBP3.42□□□□□ -1.86
SMC2-205ENST00000493955 POP7O75817 140 aaKnown RBP3.42□□□□□ -1.86
SMC2-205ENST00000493955 FSTL3O95633 263 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 F8A1P23610 371 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 HSPA13P48723 471 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 FMODQ06828 376 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 PAFAH1B3Q15102 231 aaKnown RBP3.42□□□□□ -1.86
SMC2-205ENST00000493955 TTC33Q6PID6 262 aaPredicted RBP3.42□□□□□ -1.86
SMC2-205ENST00000493955 MTERF4Q7Z6M4 381 aaKnown RBP3.42□□□□□ -1.86
SMC2-205ENST00000493955 BLIDQ8IZY5 108 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 ZFP82Q8N141 532 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 ZNF561Q8N587 486 aa3.42□□□□□ -1.86
SMC2-205ENST00000493955 SLC31A1O15431 190 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 PFN1P07737 140 aaKnown RBP3.41□□□□□ -1.86
SMC2-205ENST00000493955 EMP2P54851 167 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 MP68P56378 58 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 DYNLL1P63167 89 aaKnown RBP3.41□□□□□ -1.86
SMC2-205ENST00000493955 LAIR2Q6ISS4 152 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 FAM19A3Q7Z5A8 133 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 OR4C13Q8NGP0 309 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 SHANK2-AS3Q9BTD1 123 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 PLA2G12AQ9BZM1 189 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 NAGKQ9UJ70 344 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 ARAP2Q8WZ64 1704 aa3.41□□□□□ -1.86
SMC2-205ENST00000493955 ALPK3Q96L96 1907 aa3.4□□□□□ -1.86
SMC2-205ENST00000493955 ATP6V1G2O95670 118 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 IGHG2P01859 326 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 HLA-AP01891 365 aaKnown RBP3.4□□□□□ -1.87
SMC2-205ENST00000493955 S100A2P29034 98 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 RPL14P50914 215 aaKnown RBP3.4□□□□□ -1.87
SMC2-205ENST00000493955 RAB2AP61019 212 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 ZFAND6Q6FIF0 208 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 OR11L1Q8NGX0 322 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 DDI1Q8WTU0 396 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 SMIM12Q96EX1 92 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 REEP6Q96HR9 211 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 RBP7Q96R05 134 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 SSC5DA1L4H1 1573 aa3.4□□□□□ -1.87
SMC2-205ENST00000493955 A0A0A6YYH2 397 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 A6NJ64 397 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 ATP8B1O43520 1251 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 GTF2BQ00403 316 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 SKP2Q13309 424 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 CLEC12BQ2HXU8 276 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 LDLRAD2Q5SZI1 272 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 DRAM2Q6UX65 266 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 TMEM136Q6ZRR5 245 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 STOML3Q8TAV4 291 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 DNAJB3Q8WWF6 145 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 CHST5Q9GZS9 411 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 DRC3Q9H069 523 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 ZNF586Q9NXT0 402 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 TRAPPC1Q9Y5R8 145 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 SEC16AO15027 2179 aa3.39□□□□□ -1.87
SMC2-205ENST00000493955 SOX14O95416 240 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 ASS1P00966 412 aaKnown RBP3.38□□□□□ -1.87
SMC2-205ENST00000493955 TRGV3P03979 118 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 GRPRP30550 384 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 DNAL1Q4LDG9 190 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 PRR9Q5T870 116 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 XKRXQ6PP77 449 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 FAM151BQ6UXP7 276 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 ZNF680Q8NEM1 530 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 OR52E4Q8NGH9 312 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 OR1P1Q8NH06 330 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 MAL2Q969L2 176 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 PYURFQ96I23 114 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 ARL5BQ96KC2 179 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 TRIM45Q9H8W5 580 aaPredicted RBP3.38□□□□□ -1.87
SMC2-205ENST00000493955 NKIRAS1Q9NYS0 192 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 ZNF609O15014 1411 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 PRR14LQ5THK1 2151 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 MGAMO43451 1857 aa3.38□□□□□ -1.87
SMC2-205ENST00000493955 IGKV1OR2-108A0A075B7D4 117 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 DAPL1A0PJW8 107 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms