RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 OR8U9P0C7N5 309 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 SULT1A3P0DMM9 295 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 SULT1A4P0DMN0 295 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 IGHV1-8P0DP01 117 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 AKR1C4P17516 323 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 LTC4SQ16873 150 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 CLEC12BQ2HXU8 276 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 PHLDA2Q53GA4 152 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 CT45A1Q5HYN5 189 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
VPS52-220ENST00000493674 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 DRAM1Q8N682 238 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 Q8N7P7 452 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 CCDC71LQ8N9Z2 235 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 ZBTB34Q8NCN2 500 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 OR2AK2Q8NG84 335 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 OR8U1Q8NH10 309 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 CT45A3Q8NHU0 189 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 MITD1Q8WV92 249 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 RTN4IP1Q8WWV3 396 aaPredicted RBP10.36□□□□□ -0.75
VPS52-220ENST00000493674 FOXC2Q99958 501 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 ABHD14AQ9BUJ0 271 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 NAA60Q9H7X0 242 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 UNKLQ9H9P5 680 aaKnown RBP10.36□□□□□ -0.75
VPS52-220ENST00000493674 SHPKQ9UHJ6 478 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 SESN1Q9Y6P5 492 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 IGHV2-70DA0A0C4DH43 119 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 DBX1A6NMT0 343 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 FAM157AC9JC47 383 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 MPPED1O15442 326 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 ENSAO43768 121 aaKnown RBP10.35□□□□□ -0.75
VPS52-220ENST00000493674 PROP1O75360 226 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 FOXH1O75593 365 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 RAB7AP51149 207 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 ERVFRD-1P60508 538 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 CBX3Q13185 183 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 ABCA11PQ4W5N1 156 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 C1orf122Q6ZSJ8 110 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 KCTD9Q7L273 389 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.35□□□□□ -0.75
VPS52-220ENST00000493674 NEURL2Q9BR09 285 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 ZNF251Q9BRH9 671 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 OR2D2Q9H210 308 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 PSG11Q9UQ72 335 aa10.35□□□□□ -0.75
VPS52-220ENST00000493674 FLNAP21333 2647 aaKnown RBP10.35□□□□□ -0.75
VPS52-220ENST00000493674 ZANQ9Y493 2812 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 HSD17B6O14756 317 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 PGLYRP1O75594 196 aaPredicted RBP10.34□□□□□ -0.75
VPS52-220ENST00000493674 NFYBP25208 207 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 ZNF137PP52743 207 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 TMEM187Q14656 261 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 FCN2Q15485 313 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 SGPP2Q8IWX5 399 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 CMTM1Q8IZ96 169 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 C12orf45Q8N5I9 185 aaPredicted RBP10.34□□□□□ -0.75
VPS52-220ENST00000493674 LRTM2Q8N967 370 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 OR11H7Q8NGC8 314 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 LEAP2Q969E1 77 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 ABHD14BQ96IU4 210 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 MED28Q9H204 178 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 TMEM133Q9H2Q1 129 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 SDHAF2Q9NX18 166 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 KPTNQ9Y664 436 aa10.34□□□□□ -0.75
VPS52-220ENST00000493674 H0Y980 276 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 B3GALNT1O75752 331 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 IFNA2P01563 188 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 HLA-GP17693 338 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 VAMP1P23763 118 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 F2RP25116 425 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 UCP1P25874 307 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 ANKRD55Q3KP44 614 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 SPNS3Q6ZMD2 512 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
VPS52-220ENST00000493674 TBC1D26Q86UD7 250 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 GLYATL2Q8WU03 294 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 TNFRSF14Q92956 283 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 MSI2Q96DH6 328 aaKnown RBP10.33□□□□□ -0.76
VPS52-220ENST00000493674 TP53RKQ96S44 253 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 RNF150Q9ULK6 438 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 KCNS2Q9ULS6 477 aa10.33□□□□□ -0.76
VPS52-220ENST00000493674 ZNF469Q96JG9 3925 aaPredicted RBP10.33□□□□□ -0.76
VPS52-220ENST00000493674 F8P00451 2351 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 IGHV2-26A0A0B4J1V2 119 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 TEX13DA0A0J9YY54 714 aaPredicted RBP10.32□□□□□ -0.76
VPS52-220ENST00000493674 C3orf85A0A1B0GTC6 90 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 hCG_1809904A0A1W2PP81 198 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 A0A1W2PPE2 198 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 A0A1W2PR64 198 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 A0A1W2PRV1 198 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 J3QR06 171 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 SSNA1O43805 119 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms