RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 FAM131AQ6UXB0 335 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 MINDY2Q8NBR6 621 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 TM2D1Q9BX74 207 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 SLC23A1Q9UHI7 598 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 SLC22A1O15245 554 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 BPNT1O95861 308 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 CDK1P06493 297 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 HTR2CP28335 458 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-208ENST00000493601 UNC119Q13432 240 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 PLGLAQ15195 96 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 ECSCRQ19T08 205 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 ASPHD1Q5U4P2 390 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF660Q6AZW8 331 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-208ENST00000493601 TCTEX1D1Q8N7M0 179 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 NICN1Q9BSH3 213 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 RIMS4Q9H426 269 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-208ENST00000493601 PLEKHJ1Q9NW61 149 aa12.91□□□□□ -0.34
PTPRU-208ENST00000493601 FOXA2Q9Y261 457 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-208ENST00000493601 STAB2Q8WWQ8 2551 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 RRHO14718 337 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 CASQ2O14958 399 aaPredicted RBP12.9□□□□□ -0.34
PTPRU-208ENST00000493601 LY86O95711 162 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 SRMP19623 302 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 MC5RP33032 325 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 NDPQ00604 133 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 SPHARQ15513 63 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 C19orf54Q5BKX5 351 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 CEACAM19Q7Z692 300 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF429Q86V71 674 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 OR6M1Q8NGM8 313 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 KCNK15Q9H427 330 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 ISYNA1Q9NPH2 558 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 MGAT4AQ9UM21 535 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 WASHC3Q9Y3C0 194 aa12.9□□□□□ -0.34
PTPRU-208ENST00000493601 A0A1W2PN81 502 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 TMEM14DPA8MWL7 114 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 H7C2Y5 167 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 ITGB1BP1O14713 200 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 OVOL1O14753 267 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 RBBP9O75884 186 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 UCHL1P09936 223 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 CHRNA7P36544 502 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 QRFPP83859 136 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 RPL39P5Q59GN2 51 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 PYHIN1Q6K0P9 492 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 ABHD5Q8WTS1 349 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 URM1Q9BTM9 101 aaKnown RBP12.89□□□□□ -0.35
PTPRU-208ENST00000493601 FBXL15Q9H469 300 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 LSM2Q9Y333 95 aaKnown RBP12.89□□□□□ -0.35
PTPRU-208ENST00000493601 FBXO7Q9Y3I1 522 aa12.89□□□□□ -0.35
PTPRU-208ENST00000493601 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 H0YJW9 148 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 GSTP1P09211 210 aaKnown RBP12.88□□□□□ -0.35
PTPRU-208ENST00000493601 CT45A6P0DMU7 189 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 CT45A5P0DMU8 189 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 CT45A7P0DMV0 189 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 CD37P11049 281 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 ZBTB25P24278 435 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 CX3CL1P78423 397 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 TMEM267Q0VDI3 215 aaPredicted RBP12.88□□□□□ -0.35
PTPRU-208ENST00000493601 MED22Q15528 200 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 DCUN1D4Q92564 292 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 UFD1Q92890 307 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 SCN3BQ9NY72 215 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 RNF150Q9ULK6 438 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 A3GALT2U3KPV4 340 aa12.88□□□□□ -0.35
PTPRU-208ENST00000493601 A0A0A6YYD4 124 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 LINC01619G3V211 115 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 HSPA12AO43301 675 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 SOX15O60248 233 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 SAP30O75446 220 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 LGALS1P09382 135 aaKnown RBP12.87□□□□□ -0.35
PTPRU-208ENST00000493601 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 GLDNQ6ZMI3 551 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-208ENST00000493601 OR5AN1Q8NGI8 311 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 ABHD14BQ96IU4 210 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 RNF5Q99942 180 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 AGMATQ9BSE5 352 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 TOLLIPQ9H0E2 274 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 PARP12Q9H0J9 701 aaKnown RBP12.87□□□□□ -0.35
PTPRU-208ENST00000493601 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-208ENST00000493601 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 PLGRKTQ9HBL7 147 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 AK3Q9UIJ7 227 aa12.87□□□□□ -0.35
PTPRU-208ENST00000493601 SORL1Q92673 2214 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 ARSBP15848 533 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 CEACAM6P40199 344 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 P2RY14Q15391 338 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 ACTBL2Q562R1 376 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 LIPKQ5VXJ0 399 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms