RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 NXPH2O95156 264 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 IGKV1-5P01602 117 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 CTRLP40313 264 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 TNFRSF4P43489 277 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 HNRNPA3P51991 378 aaKnown RBP9.93□□□□□ -0.82
HDAC4-210ENST00000493582 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
HDAC4-210ENST00000493582 Q8N976 141 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 CADM4Q8NFZ8 388 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 APH1AQ96BI3 265 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 SFRP2Q96HF1 295 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 SGCZQ96LD1 299 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 LRRC61Q9BV99 259 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
HDAC4-210ENST00000493582 SDK1Q7Z5N4 2213 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 AQP7P3A6NL99 342 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 DHHO43323 396 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 S100A7P31151 101 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 SUMO3P55854 103 aaPredicted RBP9.93□□□□□ -0.82
HDAC4-210ENST00000493582 FAM69BQ5VUD6 431 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 SIGLECL1Q8N7X8 197 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 OR2M3Q8NG83 312 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 OR4B1Q8NGF8 309 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 TMEM204Q9BSN7 226 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 OR6C6A6NF89 314 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 ZNHIT1O43257 154 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 CBR3O75828 277 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 CLDN1O95832 211 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 MNX1P50219 401 aaPredicted RBP9.93□□□□□ -0.82
HDAC4-210ENST00000493582 FUT6P51993 359 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 ATP6V1FQ16864 119 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 C20orf204Q6ZNR8 217 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 C1orf174Q8IYL3 243 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 OR10G3Q8NGC4 313 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 OR1L3Q8NH93 324 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 STARD4Q96DR4 205 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 CCDC74BQ96LY2 380 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 WNT10AQ9GZT5 417 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 METTL7AQ9H8H3 244 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 GPR27Q9NS67 375 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 OBP2AQ9NY56 170 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 RNF24Q9Y225 148 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 LRP4O75096 1905 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 TRBV20OR9-2A0A075B6H5 130 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 CBY3A6NI87 242 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 K7EP13 123 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 M0QZ24 198 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 IGLC2P0DOY2 106 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 SPINK2P20155 84 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 KITLGP21583 273 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 BLKP51451 505 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 CARD18P57730 90 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 PSG4Q00888 419 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 PCSK4Q6UW60 755 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 TMEM92Q6UXU6 159 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 ADPRHL1Q8NDY3 354 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 IL1F10Q8WWZ1 152 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 UCN2Q96RP3 112 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 UQCR10Q9UDW1 63 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 PPP1R3CQ9UQK1 317 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 EYSQ5T1H1 3165 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 KRASP01116 189 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 IGHEP01854 428 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 BCL3P20749 454 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 CRYGSP22914 178 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF90Q03938 601 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 TFF3Q07654 80 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 ERASQ7Z444 233 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 KMT5CQ86Y97 462 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 MCEMP1Q8IX19 187 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 SAXO1Q8IYX7 474 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 ATOH7Q8N100 152 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 RNF2Q99496 336 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 HS3ST3A1Q9Y663 406 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 SDK2Q58EX2 2172 aa9.92□□□□□ -0.82
HDAC4-210ENST00000493582 SLC17A3O00476 420 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 FCN1O00602 326 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 SERPINA7P05543 415 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 CD99P14209 185 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 HLA-BQ31612 363 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 KRTCAP3Q53RY4 240 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-210ENST00000493582 TMEM42Q69YG0 159 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 TBL2Q9Y4P3 447 aaKnown RBP9.91□□□□□ -0.82
HDAC4-210ENST00000493582 FER1L5A0AVI2 2057 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 MDFIC2A0A1B0GVS7 189 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 IGHV4-34P06331 123 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 GPX1P07203 203 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 ESDP10768 282 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 SLC25A6P12236 298 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 EPHA8P29322 1005 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-210ENST00000493582 MAJINQ3KP22 176 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 LRFN3Q9BTN0 628 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 ULBP2Q9BZM5 246 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 S100GP29377 79 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 IER3P46695 156 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 ARL4DP49703 201 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms