RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 HTR1DP28221 377 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 SSTR5P35346 364 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 MNDAP41218 407 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 GLP1RP43220 463 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ZNF134P52741 427 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 VBP1P61758 197 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 NCS1P62166 190 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 PITPNAQ00169 270 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 EBI3Q14213 229 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 PNLIPRP3Q17RR3 467 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 CDNFQ49AH0 187 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 MORN2Q502X0 79 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 PRAMEF5Q5TYX0 476 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 HACD4Q5VWC8 232 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ZNF782Q6ZMW2 699 aaPredicted RBP5.41□□□□□ -1.54
VPS52-219ENST00000493379 SLC25A48Q6ZT89 311 aaKnown RBP5.41□□□□□ -1.54
VPS52-219ENST00000493379 GPR141Q7Z602 305 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 LHFPL4Q7Z7J7 247 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 OR5H6Q8NGV6 325 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 OR4K15Q8NH41 348 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 OR5R1Q8NH85 324 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 RFESDQ8TAC1 157 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 RAB2BQ8WUD1 216 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ACOT12Q8WYK0 555 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 C22orf15Q8WYQ4 148 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ARL11Q969Q4 196 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 AGMATQ9BSE5 352 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ZNF747Q9BV97 191 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 MMP28Q9H239 520 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 DPAGT1Q9H3H5 408 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 TAF9BQ9HBM6 251 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ZNF286AQ9HBT8 521 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 C12orf4Q9NQ89 552 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 RHBDL2Q9NX52 303 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 AK3Q9UIJ7 227 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 JPT1Q9UK76 154 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 TRAPPC2LQ9UL33 140 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 GAB2Q9UQC2 676 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 MMP24Q9Y5R2 645 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 TRAV39A0A0B4J263 110 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 IGKV1-6A0A0C4DH72 117 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 MDFIC2A0A1B0GVS7 189 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 DNAJC9-AS1A6NH13 148 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 LEUTXA8MZ59 168 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 TRDCB7Z8K6 153 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 XRCC3O43542 346 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 TSPAN9O75954 239 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 APOA1P02647 267 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 ARG1P05089 322 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 HKR1P10072 659 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 ZNF182P17025 639 aaPredicted RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 RORCP51449 518 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 PTTG1IPP53801 180 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 LSM3P62310 102 aaKnown RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 PRB3Q04118 309 aaPredicted RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 MXD1Q05195 221 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 ZNF816Q0VGE8 651 aaPredicted RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 BAMBIQ13145 260 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 CT45A1Q5HYN5 189 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 IDNKQ5T6J7 187 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 OLFML2AQ68BL7 652 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 RBMS3Q6XE24 437 aaKnown RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 TRAPPC6BQ86SZ2 158 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 ODF3L1Q8IXM7 274 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 CT45A3Q8NHU0 189 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 LGALS14Q8TCE9 139 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 CCDC107Q8WV48 283 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 GALMQ96C23 342 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 CMSS1Q9BQ75 279 aaKnown RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 CABLES2Q9BTV7 478 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 RBM38Q9H0Z9 239 aaKnown RBP5.4□□□□□ -1.54
VPS52-219ENST00000493379 KCNIP1Q9NZI2 227 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 ANAPC10Q9UM13 185 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 FAM96BQ9Y3D0 163 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 CEPT1Q9Y6K0 416 aa5.4□□□□□ -1.54
VPS52-219ENST00000493379 A0A075B6Q4 140 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 TRBV6-7A0A0A0MS04 114 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 MEX3AA1L020 520 aaKnown RBP5.39□□□□□ -1.55
VPS52-219ENST00000493379 SMIM30A4D0T7 59 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 A6NDX4 124 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 M0QYG6 137 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 SSX5O60225 188 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 PROP1O75360 226 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 NDUFA7O95182 113 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 IGHV4-59P01825 116 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 HLA-DQB1P01920 261 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 FCGR3AP08637 254 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 GNB3P16520 340 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 COX7A1P24310 79 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 CEACAM3P40198 252 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 SERPINB10P48595 397 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 RAB7AP51149 207 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 SPCS2Q15005 226 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 HERPUD1Q15011 391 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 LRRC75BQ2VPJ9 315 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 TPTE2P1Q5T6R2 138 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 FAM71F2Q6NXP2 309 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 PDZD9Q8IXQ8 264 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 OR8H3Q8N146 312 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 Q8N2B8 174 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms