RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PVALBP20472 110 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-216ENST00000492977 ZNF585BQ52M93 769 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 ZNF66Q6ZN08 573 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 DMBX1Q8NFW5 382 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 PCNPQ8WW12 178 aaKnown RBP11.66□□□□□ -0.54
PTPN7-216ENST00000492977 GPR146Q96CH1 333 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 DCAF16Q9NXF7 216 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
PTPN7-216ENST00000492977 RCL1Q9Y2P8 373 aaKnown RBP11.66□□□□□ -0.54
PTPN7-216ENST00000492977 ARID1AO14497 2285 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PPIAL4EA0A075B759 164 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PPIAL4DF5H284 164 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PITX3O75364 302 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PLAUP00749 431 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 IGKV1-39P01597 117 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 IGKV1D-39P04432 117 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PPIAL4FP0DN26 164 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 LOXL3P58215 753 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 CDSNQ15517 529 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 TMEM30BQ3MIR4 351 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-216ENST00000492977 CORO2AQ92828 525 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 HSD17B10Q99714 261 aaKnown RBP11.65□□□□□ -0.54
PTPN7-216ENST00000492977 C11orf1Q9H5F2 150 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 TMEM106BQ9NUM4 274 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 CLN8Q9UBY8 286 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PSG11Q9UQ72 335 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 PPIAL4AQ9Y536 164 aa11.65□□□□□ -0.54
PTPN7-216ENST00000492977 A0A1B0GW55 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DEFB108AA8MXU0 73 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 J3QL48 77 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L2P0CJ85 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L3P0CJ86 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L4P0CJ87 422 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L5P0CJ88 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L6P0CJ89 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L7P0CJ90 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 TMEM33P57088 247 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 TFF3Q07654 80 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 ZNF672Q499Z4 452 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-216ENST00000492977 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-216ENST00000492977 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 RNASE11Q8TAA1 199 aaKnown RBP11.64□□□□□ -0.55
PTPN7-216ENST00000492977 CCL17Q92583 94 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 C5orf30Q96GV9 206 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 LINC00574Q9H8X3 128 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 SDHAF2Q9NX18 166 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4Q9UBX2 424 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-216ENST00000492977 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
PTPN7-216ENST00000492977 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 MED19A0JLT2 244 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-216ENST00000492977 MEX3AA1L020 520 aaKnown RBP11.63□□□□□ -0.55
PTPN7-216ENST00000492977 ZNF729A6NN14 1252 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-216ENST00000492977 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 JTBO76095 146 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 ATG12O94817 140 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 CLDN1O95832 211 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 LPAR6P43657 344 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 POLR2GP62487 172 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTPN7-216ENST00000492977 LTC4SQ16873 150 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 CXorf66Q5JRM2 361 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-216ENST00000492977 DUX4L9Q6RFH8 374 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-216ENST00000492977 MUC15Q8N387 334 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 LRRC20Q8TCA0 184 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
PTPN7-216ENST00000492977 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 hADV38S2A0JD32 116 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 IGKV1-5P01602 117 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 LOXP28300 417 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 GPR12P47775 334 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 RAB7AP51149 207 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 AKR1C2P52895 323 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 RPL30P62888 115 aaKnown RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 VAMP2P63027 116 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 EIF5AL1Q6IS14 154 aaKnown RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 FGFRL1Q8N441 504 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 TCTEX1D2Q8WW35 142 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 GFOD1Q9NXC2 390 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 TAS2R3Q9NYW6 316 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 ROS1P08922 2347 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 ARFGEF3Q5TH69 2177 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 ATRXP46100 2492 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 CACNA1AO00555 2505 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 IGHV1-69-2A0A0G2JMI3 117 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 WRBO00258 174 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms