RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 NEIL3Q8TAT5 605 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 OR51E1Q8TCB6 317 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 NT5CQ8TCD5 201 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 RAB2BQ8WUD1 216 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 STARD4Q96DR4 205 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 OVOL2Q9BRP0 275 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 GINS4Q9BRT9 223 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 SFXN3Q9BWM7 321 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 WDR13Q9H1Z4 485 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 CXorf21Q9HAI6 301 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM9BQ9NQ34 198 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 PARP11Q9NR21 331 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 FZD1Q9UP38 647 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 SOX21Q9Y651 276 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-220ENST00000492859 NUP210LQ5VU65 1888 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 DOCK5Q9H7D0 1870 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ABCC5O15440 1437 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 TRAV5A0A0B4J249 113 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 VWC2LB2RUY7 222 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 C8orf87E5RJ46 101 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 F6UB75 175 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 LMX1BO60663 402 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 REM1O75628 298 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ARL6IP5O75915 188 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 SOD3P08294 240 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 IGLC1P0CG04 106 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 HKR1P10072 659 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 RBM11P57052 281 aaKnown RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF85Q03923 595 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF92Q03936 586 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF141Q15928 474 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 IQCJQ1A5X6 159 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 PRR30Q53SZ7 412 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 TCEAL5Q5H9L2 206 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 PIK3CD-AS1Q5SR53 167 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF429Q86V71 674 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF695Q8IW36 515 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 OR51T1Q8NGJ9 327 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 OR10G6Q8NH81 332 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 CT55Q8WUE5 264 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 FRZBQ92765 325 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 MAGOHBQ96A72 148 aaKnown RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 C4orf45Q96LM5 186 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM70Q9BUB7 260 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 GGTLC1Q9BX51 225 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 PBOV1Q9GZY1 135 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 POLR2J3Q9H1A7 115 aaKnown RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 NOX3Q9HBY0 568 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF331Q9NQX6 463 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 CA10Q9NS85 328 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 C19orf73Q9NVV2 129 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 TVP23BQ9NYZ1 205 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 EHFQ9NZC4 300 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 TAAR2Q9P1P5 351 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF443Q9Y2A4 671 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 INSIG2Q9Y5U4 225 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 ARAP2Q8WZ64 1704 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 C2orf16Q68DN1 1984 aa3.43□□□□□ -1.86
BRCA1-220ENST00000492859 GREB1LQ9C091 1923 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-220ENST00000492859 LRRC7Q96NW7 1537 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 RIIAD1A6NNX1 92 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 B4DEV8 164 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 H7C1H1 209 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 CDC42EP2O14613 210 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 OVOL1O14753 267 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 RAMP1O60894 148 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 SLC2A10O95528 541 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 DUS4LO95620 317 aaKnown RBP3.42□□□□□ -1.86
BRCA1-220ENST00000492859 EPPINO95925 133 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 SHBGP04278 402 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 HOXB7P09629 217 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ERGP11308 486 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 CD38P28907 300 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 PRSS3P35030 304 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF83P51522 516 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 GNG11P61952 73 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 TIMM10P62072 90 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 MMDQ15546 238 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 OR7A5Q15622 319 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 CD226Q15762 336 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 DUSP5Q16690 384 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 C12orf74Q32Q52 190 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM30BQ3MIR4 351 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ALG10Q5BKT4 473 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 MEIG1Q5JSS6 88 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 PAPPA-AS1Q5QFB9 102 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 TSPO2Q5TGU0 170 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM207Q6UWW9 146 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF793Q6ZN11 406 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 PIP4P1Q86T03 277 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 C20orf196Q8IYI0 205 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 SLC25A45Q8N413 288 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 TTC9CQ8N5M4 171 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 LINC00482Q8N8I6 264 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ZDHHC22Q8N966 263 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 PPTC7Q8NI37 304 aa3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF564Q8TBZ8 553 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF431Q8TF32 576 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-220ENST00000492859 FGF11Q92914 225 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms