RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GDNFP39905 211 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 OR3A4PP47883 348 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 SNU13P55769 128 aaKnown RBP7.23□□□□□ -1.25
HDAC3-212ENST00000492407 KRTAP10-11P60412 298 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 ZP1P60852 638 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 SCN1BQ07699 218 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 KLHL22Q53GT1 634 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 NHLRC3Q5JS37 347 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF691Q5VV52 312 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF529Q6P280 563 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 BAIAP2L2Q6UXY1 529 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 ASCL4Q6XD76 172 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 AMIGO2Q86SJ2 522 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 EIF4E3Q8N5X7 224 aaKnown RBP7.23□□□□□ -1.25
HDAC3-212ENST00000492407 C5orf56Q8N8D9 126 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 STOML3Q8TAV4 291 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 CNIH3Q8TBE1 160 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 EDARADDQ8WWZ3 215 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 MRGPRFQ96AM1 343 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 PFDN5Q99471 154 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 TPPP3Q9BW30 176 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 CALYQ9NYX4 217 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 IDI2-AS1Q9NZ38 188 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 KCNIP3Q9Y2W7 256 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 GOLT1BQ9Y3E0 138 aa7.23□□□□□ -1.25
HDAC3-212ENST00000492407 MEIKINA0A087WXM9 373 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 A0A1W2PPI3 338 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 WI2-2373I1.2A0A1W2PRP0 233 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 MPTX1A8MV57 137 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 KRBOX1C9JBD0 128 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 J3QLW9 94 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 FADS2O95864 444 aaKnown RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 PPBPP02775 128 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 GAPDHP04406 335 aaKnown RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ALPLP05186 524 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF19P17023 458 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ZP3P21754 424 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 NFYBP25208 207 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 RBX1P62877 108 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 NHLH2Q02577 135 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 CD69Q07108 199 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF816Q0VGE8 651 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 RAB40BQ12829 278 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 RBM39Q14498 530 aaKnown RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ATXN7L3Q14CW9 347 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ZFP69Q49AA0 526 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 CDNFQ49AH0 187 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 PAN3Q58A45 887 aaKnown RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 C9orf152Q5JTZ5 239 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 TEX38Q6PEX7 206 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 OR2W3Q7Z3T1 314 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 LINC00596Q86U02 117 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 TGIF2LXQ8IUE1 241 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 STX19Q8N4C7 294 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 LINC00311Q8N616 119 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 OR51A4Q8NGJ6 313 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 OR5AK2Q8NH90 309 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 EAF1Q96JC9 268 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 C4orf36Q96KX1 117 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 Q96MT0 163 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 WWC2-AS2Q96NR7 200 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 P2RX4Q99571 388 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 JAM3Q9BX67 310 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 YTHDF1Q9BYJ9 559 aaKnown RBP7.22□□□□□ -1.25
HDAC3-212ENST00000492407 CLEC5AQ9NY25 188 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 IL36GQ9NZH8 169 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF580Q9UK33 172 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 RAB26Q9ULW5 256 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 DHDHQ9UQ10 334 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 PSG11Q9UQ72 335 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
HDAC3-212ENST00000492407 DSCAML1Q8TD84 2053 aa7.21□□□□□ -1.25
HDAC3-212ENST00000492407 TRAV24A0A0B4J272 114 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 SERPINE3A8MV23 424 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 AP4M1O00189 453 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF780AO75290 641 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 SRMP19623 302 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 DGCR2P98153 550 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 GAMTQ14353 236 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 TMEM30BQ3MIR4 351 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 OR2B11Q5JQS5 317 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 C10orf99Q6UWK7 81 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 IZUMO2Q6UXV1 221 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 SLC35E3Q7Z769 313 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF695Q8IW36 515 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 IZUMO1Q8IYV9 350 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 STPG2Q8N412 459 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 DRAM1Q8N682 238 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 NANOGP1Q8N7R0 232 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 RNF152Q8N8N0 203 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 OR13A1Q8NGR1 328 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 OR10AC1Q8NH08 325 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 OR56B4Q8NH76 319 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms