RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 A3GALT2U3KPV4 340 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 RGS11O94810 467 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 GNAO1P09471 354 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 CT45A6P0DMU7 189 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 CT45A5P0DMU8 189 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 CT45A7P0DMV0 189 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 HTR2CP28335 458 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 WNT4P56705 351 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 RPS27AP62979 156 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 CX3CL1P78423 397 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 AHSA2Q719I0 299 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 SVOPQ8N4V2 548 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 ARPC1AQ92747 370 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 CST11Q9H112 138 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 CNOT2Q9NZN8 540 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 PSORS1C1Q9UIG5 152 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 GAB2Q9UQC2 676 aa12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 FOXA2Q9Y261 457 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-209ENST00000490889 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 TRIM64CA6NLI5 447 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 LINC01619G3V211 115 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 RRHO14718 337 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 MYL12BO14950 172 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 NAPSAO96009 420 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 FRMD6-AS1P0C7T7 363 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 GABPB1Q06547 395 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 UNC119Q13432 240 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 CASC10Q5T4H9 136 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 ZNF660Q6AZW8 331 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 FAM71F2Q6NXP2 309 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 ZNF880Q6PDB4 577 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 LRRTM1Q86UE6 522 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 DHRSXQ8N5I4 330 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 NANOGP1Q8N7R0 232 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 MUC7Q8TAX7 377 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 NEDD4LQ96PU5 975 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 FAM103A1Q9BTL3 118 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 SLC23A1Q9UHI7 598 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 NUBP2Q9Y5Y2 271 aa12.81□□□□□ -0.36
SRGAP3-209ENST00000490889 H0YJW9 148 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 IGHV3-11P01762 117 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 GP9P14770 177 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 ACSM6Q6P461 480 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 TM2D1Q9BX74 207 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 TMEM59Q9BXS4 323 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 PIPOXQ9P0Z9 390 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 ABRACLQ9P1F3 81 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 STEAP1Q9UHE8 339 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 LRRC42Q9Y546 428 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 STARD9Q9P2P6 4700 aa12.8□□□□□ -0.36
SRGAP3-209ENST00000490889 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 RAB29O14966 203 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 PROP1O75360 226 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 UBBP0CG47 229 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 MAPK3P27361 379 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 QRFPP83859 136 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 ACSM3Q53FZ2 586 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 CD200R1LQ6Q8B3 271 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 FBLIM1Q8WUP2 373 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 AGMATQ9BSE5 352 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 HDHD3Q9BSH5 251 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 FKBP14Q9NWM8 211 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 OR1A1Q9P1Q5 309 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 CSMD3Q7Z407 3707 aa12.79□□□□□ -0.36
SRGAP3-209ENST00000490889 OR5H14A6NHG9 310 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 TMEM14DPA8MWL7 114 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 LINC00205P59089 165 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 PLGLAQ15195 96 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 RBM48Q5RL73 367 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 PACRGLQ8N7B6 248 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 TCTEX1D1Q8N7M0 179 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 BPIFB6Q8NFQ5 453 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 OR5AN1Q8NGI8 311 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 ABHD5Q8WTS1 349 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 THRSPQ92748 146 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 MS4A10Q96PG2 267 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 CLCC1Q96S66 551 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 CHMP1AQ9HD42 196 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 PLCXD1Q9NUJ7 323 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 ERGIC3Q9Y282 383 aa12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 EPPK1P58107 5090 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-209ENST00000490889 H7C2Y5 167 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 SLC22A1O15245 554 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 GSTP1P09211 210 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 CD37P11049 281 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 ACTBL2Q562R1 376 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 GLT8D1Q68CQ7 371 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 UNQ5815/PRO19632Q6UWF5 114 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 PPP1R27Q86WC6 154 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 C8orf59Q8N0T1 100 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 DRAXINQ8NBI3 349 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 LFNGQ8NES3 379 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 OR6Q1Q8NGQ2 317 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 RHOVQ96L33 236 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms