RNA–Protein interactions for RNA: ENST00000490788.1

HMGB1-208, Transcript of high mobility group box 1, humanhuman

TSL 2

Gene HMGB1, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-208ENST00000490788 TDRG1Q3Y452 100 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SPIN4Q56A73 249 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 CT45A2Q5DJT8 189 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 LGSNQ5TDP6 509 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR2G6Q5TZ20 316 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 STEAP4Q687X5 459 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR2T2Q6IF00 324 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SLC8B1Q6J4K2 584 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PRSS54Q6PEW0 395 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 CNIH2Q6PI25 160 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 KCNIP4Q6PIL6 250 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 UNQ5815/PRO19632Q6UWF5 114 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 WDR82Q6UXN9 313 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 C2orf66Q6UXQ4 117 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 HEPN1Q6WQI6 88 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 C19orf35Q6ZS72 473 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ACOT7LQ6ZUV0 252 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 HIST2H3AQ71DI3 136 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 C6orf120Q7Z4R8 191 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR8I2Q8N0Y5 310 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 KIR2DL5AQ8N109 375 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR6V1Q8N148 313 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 MUC15Q8N387 334 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 MTURNQ8N3F0 131 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 GTPBP8Q8N3Z3 284 aaPredicted RBP1.59□□□□□ -2.15
HMGB1-208ENST00000490788 FAM24BQ8N5W8 94 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SLC35G3Q8N808 338 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ZNF738Q8NE65 137 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SDR9C7Q8NEX9 313 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SLC26A10Q8NG04 563 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR4K2Q8NGD2 314 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR56A4Q8NGH8 313 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR13C4Q8NGS5 318 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR2T27Q8NH04 317 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR52E5Q8NH55 327 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 LYPD6BQ8NI32 183 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 KCNG3Q8TAE7 436 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 FAM45AQ8TCE6 357 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SFXN5Q8TD22 340 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 RNASEH2CQ8TDP1 164 aaKnown RBP1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SAP25Q8TEE9 199 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 EEF1AKMT1Q8WVE0 214 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 RNF133Q8WVZ7 376 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 OR8D1Q8WZ84 308 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 FCGR1BQ92637 280 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 HIST1H2ACQ93077 130 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PTH2Q96A98 100 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PTX4Q96A99 478 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ISOC2Q96AB3 205 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PIK3IP1Q96FE7 263 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 MRAP2Q96G30 205 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 DIRAS2Q96HU8 199 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ZNF75AQ96N20 296 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 IL4I1Q96RQ9 567 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 NPY6RQ99463 290 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 P2RX4Q99571 388 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SIGMAR1Q99720 223 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 NRIP2Q9BQI9 281 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 CHRDL1Q9BU40 450 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 WRAP53Q9BUR4 548 aaKnown RBP1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ALG12Q9BV10 488 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 TAPBPLQ9BX59 468 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 GPR174Q9BXC1 333 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SEC11CQ9BY50 192 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ARL6Q9H0F7 186 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 FXYD6Q9H0Q3 95 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 LPAR5Q9H1C0 372 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 GTSF1LQ9H1H1 148 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 TUBA4BQ9H853 241 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 CALHM2Q9HA72 323 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 BEX1Q9HBH7 125 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 LYRM4Q9HD34 91 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PIGVQ9NUD9 493 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 UQCC1Q9NVA1 299 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 IL17CQ9P0M4 197 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 GALPQ9UBC7 116 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 P2RX2Q9UBL9 471 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 VPS29Q9UBQ0 182 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 COPS7AQ9UBW8 275 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 SLC23A2Q9UGH3 650 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PSORS1C1Q9UIG5 152 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 CRLS1Q9UJA2 301 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 JPT1Q9UK76 154 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 FLVCR2Q9UPI3 526 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 PSG8Q9UQ74 426 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 WDR45Q9Y484 360 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 CSDC2Q9Y534 153 aaKnown RBP1.59□□□□□ -2.15
HMGB1-208ENST00000490788 FLVCR1Q9Y5Y0 555 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 NPTNQ9Y639 398 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ARL5AQ9Y689 179 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 ENPP4Q9Y6X5 453 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 KIF25-AS1Q9Y6Z4 181 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 VWA8A3KMH1 1905 aa1.59□□□□□ -2.15
HMGB1-208ENST00000490788 WNK1Q9H4A3 2382 aa1.59□□□□□ -2.16
HMGB1-208ENST00000490788 HCFC1P51610 2035 aa1.59□□□□□ -2.16
HMGB1-208ENST00000490788 LRP4O75096 1905 aa1.58□□□□□ -2.16
HMGB1-208ENST00000490788 MYH7P12883 1935 aa1.58□□□□□ -2.16
HMGB1-208ENST00000490788 PRRC2AP48634 2157 aaKnown RBP1.58□□□□□ -2.16
HMGB1-208ENST00000490788 KNTC1P50748 2209 aa1.58□□□□□ -2.16
HMGB1-208ENST00000490788 IGHV2OR16-5A0A0B4J2B6 119 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms