RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
HDAC1-210ENST00000490081 ZNF833PQ6ZTB9 187 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 IL17RELQ6ZVW7 336 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 ODF3L1Q8IXM7 274 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 BCL6BQ8N143 479 aaPredicted RBP10.09□□□□□ -0.79
HDAC1-210ENST00000490081 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 TMEM86BQ8N661 226 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 LEAP2Q969E1 77 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 TRIM63Q969Q1 353 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 SDHCQ99643 169 aaPredicted RBP10.09□□□□□ -0.79
HDAC1-210ENST00000490081 IFI27L2Q9H2X8 130 aa10.09□□□□□ -0.79
HDAC1-210ENST00000490081 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 FAM172BPA6NC97 362 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 CLDN34H7C241 214 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 SLC31A2O15432 143 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 HLA-DMAP28067 261 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 HRH1P35367 487 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 RFX2P48378 723 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 GNG10P50151 68 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 LUMP51884 338 aaPredicted RBP10.08□□□□□ -0.8
HDAC1-210ENST00000490081 ARHGDIBP52566 201 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 AP3S2P59780 193 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 PRB3Q04118 309 aaPredicted RBP10.08□□□□□ -0.8
HDAC1-210ENST00000490081 MEF2DQ14814 521 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 RNASE10Q5GAN6 216 aaKnown RBP10.08□□□□□ -0.8
HDAC1-210ENST00000490081 STEAP1BQ6NZ63 245 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 LHFPL4Q7Z7J7 247 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 THNSL2Q86YJ6 484 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 PDZD9Q8IXQ8 264 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 ZBTB34Q8NCN2 500 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 OR6F1Q8NGZ6 308 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 BORCS5Q969J3 196 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 S1PR3Q99500 378 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 CCDC32Q9BV29 185 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 EHFQ9NZC4 300 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 ZNRD1Q9P1U0 126 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 POMT1Q9Y6A1 747 aa10.08□□□□□ -0.8
HDAC1-210ENST00000490081 PROP1O75360 226 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 PPYP01298 95 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 IGHV3-7P01780 117 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 PMP2P02689 132 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 CD3DP04234 171 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 AKAIN1P0CW23 69 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 FCGR2CP31995 323 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 IER3P46695 156 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 UCP3P55916 312 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 LSAMPQ13449 338 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 EBI3Q14213 229 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 LPCAT3Q6P1A2 487 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 TMEM17Q86X19 198 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 DYNAPQ8N1N2 210 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 OR5R1Q8NH85 324 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF418Q8TF45 676 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-210ENST00000490081 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-210ENST00000490081 RPEQ96AT9 228 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 MOB3AQ96BX8 217 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-210ENST00000490081 JMJD8Q96S16 334 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 WDR12Q9GZL7 423 aaKnown RBP10.07□□□□□ -0.8
HDAC1-210ENST00000490081 PARP12Q9H0J9 701 aaKnown RBP10.07□□□□□ -0.8
HDAC1-210ENST00000490081 DPAGT1Q9H3H5 408 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF221Q9UK13 617 aa10.07□□□□□ -0.8
HDAC1-210ENST00000490081 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 A0A1W2PPE3 182 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 HSD17B6O14756 317 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 RAB3DO95716 219 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 IFNA6P05013 189 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 OR8U9P0C7N5 309 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF735P0CB33 412 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 NFYAP23511 347 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-210ENST00000490081 CD1BP29016 333 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 BRS3P32247 399 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 HILS1P60008 231 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 TAGLNQ01995 201 aaKnown RBP10.06□□□□□ -0.8
HDAC1-210ENST00000490081 KLF9Q13886 244 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF846Q147U1 533 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 SSX2Q16385 188 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 BAK1Q16611 211 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 RBMS3Q6XE24 437 aaKnown RBP10.06□□□□□ -0.8
HDAC1-210ENST00000490081 LHFPL1Q86WI0 220 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 LYG1Q8N1E2 194 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 TOMM5Q8N4H5 51 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 OR8U1Q8NH10 309 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 TERB2Q8NHR7 220 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 PIFOQ8TCI5 191 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 SSMEM1Q8WWF3 244 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 TOMM40LQ969M1 308 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 AKR1E2Q96JD6 320 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
HDAC1-210ENST00000490081 SAA2-SAA4A0A096LPE2 208 aa10.05□□□□□ -0.8
HDAC1-210ENST00000490081 IGHV1-3A0A0C4DH29 117 aa10.05□□□□□ -0.8
HDAC1-210ENST00000490081 A0A1W2PPI3 338 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms