RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 STEAP1Q9UHE8 339 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 PSORS1C1Q9UIG5 152 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF107Q9UII5 783 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 JPT1Q9UK76 154 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 MGAT4AQ9UM21 535 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 CEPT1Q9Y6K0 416 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 TRBV5-7A0A0A0MS05 114 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 RTL8CO15255 209 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 HSPA12AO43301 675 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 CRTAPO75718 401 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 IGHG4P01861 327 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 IGF1P05019 195 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 MGMTP16455 207 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 GDNFP39905 211 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 PSMD7P51665 324 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 SLURP1P55000 103 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 KIAA0141Q14154 515 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 HNF4GQ14541 408 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 MMDQ15546 238 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 RAB12Q6IQ22 244 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF497Q6ZNH5 498 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 SLC25A48Q6ZT89 311 aaKnown RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 AHSA2Q719I0 299 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 MOB1BQ7L9L4 216 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 NANOGP1Q8N7R0 232 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 Q8N9W7 124 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 OR10K1Q8NGX5 313 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 RFESDQ8TAC1 157 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 RGP1Q92546 391 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 ARPC1AQ92747 370 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 UFD1Q92890 307 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 MUL1Q969V5 352 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 GALMQ96C23 342 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 PGLYRP3Q96LB9 341 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 UBE2E2Q96LR5 201 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 DERL3Q96Q80 235 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 OR5B12Q96R08 314 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 OR14A2Q96R54 314 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 S1PR3Q99500 378 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 URM1Q9BTM9 101 aaKnown RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 CENPOQ9BU64 300 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 SELENOIQ9C0D9 397 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 OR51J1Q9H342 316 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 RIMS4Q9H426 269 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 PIPOXQ9P0Z9 390 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 RCC2Q9P258 522 aaKnown RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 CLEC2DQ9UHP7 191 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 BLOC1S6Q9UL45 172 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 KLK5Q9Y337 293 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-209ENST00000489861 PEX16Q9Y5Y5 336 aa5.55□□□□□ -1.52
COL9A1-209ENST00000489861 FAT1Q14517 4588 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 YPEL1O60688 119 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 PDCD6O75340 191 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 RBBP9O75884 186 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 ARL6IP5O75915 188 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 CDK2AP2O75956 126 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 MT-ND4P03905 459 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 MAS1P04201 325 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 CDK1P06493 297 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 MC5RP33032 325 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 HTD2P86397 168 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 CFHR3Q02985 330 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 SPHARQ15513 63 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 HSD17B12Q53GQ0 312 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 LY6G6FQ5SQ64 297 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 SYT6Q5T7P8 510 aaPredicted RBP5.54□□□□□ -1.52
COL9A1-209ENST00000489861 BAIAP2L2Q6UXY1 529 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF485Q8NCK3 441 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 KCNG3Q8TAE7 436 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 PLPPR1Q8TBJ4 325 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 MYOZ3Q8TDC0 251 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 FBLIM1Q8WUP2 373 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 EDARADDQ8WWZ3 215 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 FLYWCH2Q96CP2 140 aaKnown RBP5.54□□□□□ -1.52
COL9A1-209ENST00000489861 YPEL2Q96QA6 119 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 THAP7Q9BT49 309 aaPredicted RBP5.54□□□□□ -1.52
COL9A1-209ENST00000489861 ABHD14AQ9BUJ0 271 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 SCRT2Q9NQ03 307 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 OR2S2Q9NQN1 319 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 SIGLEC8Q9NYZ4 499 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 VSIG4Q9Y279 399 aa5.54□□□□□ -1.52
COL9A1-209ENST00000489861 TRAV8-7A0A075B6U6 113 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 PNMA8CA0A1B0GUJ8 204 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 OR5H14A6NHG9 310 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 PTGES3LE9PB15 166 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 C15orf65H3BRN8 121 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 J3QL48 77 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 RAB29O14966 203 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 NBR2O15453 112 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 SC5DO75845 299 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 IGLV1-51P01701 117 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 HLA-DRB1P01911 266 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 SRMP19623 302 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 VAMP1P23763 118 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 PSMB8P28062 276 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 REG1BP48304 166 aa5.53□□□□□ -1.52
COL9A1-209ENST00000489861 RPS11P62280 158 aaKnown RBP eCLIP5.53□□□□□ -1.52
COL9A1-209ENST00000489861 MRPS15P82914 257 aaKnown RBP5.53□□□□□ -1.52
COL9A1-209ENST00000489861 RUNX1Q01196 453 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms