RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 NAA40Q86UY6 237 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 HS3ST5Q8IZT8 346 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 ZNF567Q8N184 647 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 ZFAND2AQ8N6M9 145 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 TMEM161BQ8NDZ6 487 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 TESCQ96BS2 214 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 SLC25A44Q96H78 314 aaPredicted RBP2.25□□□□□ -2.05
XRN1-213ENST00000489241 C8orf76Q96K31 380 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 UCK1Q9HA47 277 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 DNAJC12Q9UKB3 198 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 CARHSP1Q9Y2V2 147 aaKnown RBP2.25□□□□□ -2.05
XRN1-213ENST00000489241 ALG5Q9Y673 324 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 THADAQ6YHU6 1953 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 ISG15P05161 165 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 OR4A8P0C604 315 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 RNASE2P10153 161 aaKnown RBP2.24□□□□□ -2.05
XRN1-213ENST00000489241 CD36P16671 472 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 PPP1CCP36873 323 aaKnown RBP2.24□□□□□ -2.05
XRN1-213ENST00000489241 DAPP51397 102 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 AP2S1P53680 142 aaPredicted RBP2.24□□□□□ -2.05
XRN1-213ENST00000489241 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 FGF12P61328 243 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 SLC35A2P78381 396 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 FABP5Q01469 135 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 EBPQ15125 230 aaKnown RBP2.24□□□□□ -2.05
XRN1-213ENST00000489241 ZNF141Q15928 474 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 IMPG1Q17R60 797 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 COMMD7Q86VX2 200 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 Q8WTZ3 238 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 HRASLSQ9HDD0 168 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 DKKL1Q9UK85 242 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 PLCH2O75038 1416 aa2.24□□□□□ -2.05
XRN1-213ENST00000489241 BRD4O60885 1362 aaPredicted RBP2.23□□□□□ -2.05
XRN1-213ENST00000489241 ZBED9Q6R2W3 1325 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.23□□□□□ -2.05
XRN1-213ENST00000489241 PLB1Q6P1J6 1458 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 TRAV8-1A0A0A6YYK1 113 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 LINC00862A6NCI5 91 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 STK16O75716 305 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 REG1AP05451 166 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 IL3P08700 152 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 OPRM1P35372 400 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 RPS24P62847 133 aaKnown RBP2.23□□□□□ -2.05
XRN1-213ENST00000489241 HLA-DRB3P79483 266 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 GNA13Q14344 377 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 RGS21Q2M5E4 152 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 DEFB134Q4QY38 66 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 CCDC112Q8NEF3 446 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 GPR32P1Q8NGA4 272 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 IGF2BP2-AS1Q96M15 143 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 OR52B2Q96RD2 323 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 C1QTNF6Q9BXI9 259 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 ABCG5Q9H222 651 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 GUCA1BQ9UMX6 200 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 POLR1DQ9Y2S0 133 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 FIS1Q9Y3D6 152 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 MYO5BQ9ULV0 1848 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 SPATA31E1Q6ZUB1 1445 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 YLPM1P49750 1951 aaKnown RBP2.23□□□□□ -2.05
XRN1-213ENST00000489241 NID2Q14112 1375 aa2.23□□□□□ -2.05
XRN1-213ENST00000489241 A0A1W2PNN7 141 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 C5orf49A4QMS7 147 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 D6RAR5 112 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 ACOX3O15254 700 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 CALB1P05937 261 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 SERPINA6P08185 405 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 ZNF22P17026 224 aaPredicted RBP2.22□□□□□ -2.05
XRN1-213ENST00000489241 ZNF7P17097 686 aaPredicted RBP2.22□□□□□ -2.05
XRN1-213ENST00000489241 CRABP1P29762 137 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 OR10J1P30954 320 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 BAMBIQ13145 260 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 JOSD1Q15040 202 aaPredicted RBP2.22□□□□□ -2.05
XRN1-213ENST00000489241 N4BP2L1Q5TBK1 243 aaPredicted RBP2.22□□□□□ -2.05
XRN1-213ENST00000489241 C1orf195Q5TG92 126 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 RASSF6Q6ZTQ3 369 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 TBX5Q99593 518 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 MRPS26Q9BYN8 205 aaKnown RBP2.22□□□□□ -2.05
XRN1-213ENST00000489241 HES4Q9HCC6 221 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 C3orf18Q9UK00 162 aa2.22□□□□□ -2.05
XRN1-213ENST00000489241 PCYT1BQ9Y5K3 369 aaPredicted RBP2.22□□□□□ -2.05
XRN1-213ENST00000489241 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.21□□□□□ -2.06
XRN1-213ENST00000489241 IGSF23A1L1A6 192 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 A8MWP6 167 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 EVPLLA8MZ36 301 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 M0R381 172 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 REG1BP48304 166 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 RSU1Q15404 277 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 MRPL51Q4U2R6 128 aaKnown RBP2.21□□□□□ -2.06
XRN1-213ENST00000489241 PYDC2Q56P42 97 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 CEP170Q5SW79 1584 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 CLVS2Q5SYC1 327 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 LPCAT4Q643R3 524 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 C1orf174Q8IYL3 243 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 ZNF664Q8N3J9 261 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 OR5P3Q8WZ94 311 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 NUP205Q92621 2012 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 RAD51AP1Q96B01 352 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 XPNPEP1Q9NQW7 623 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms