RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 ARID1AO14497 2285 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
COL21A1-211ENST00000488912 SPINT2O43291 252 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 NDUFB3O43676 98 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 GZMHP20718 246 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 VAMP1P23763 118 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 COL8A1P27658 744 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 CEACAM6P40199 344 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 EFNA4P52798 201 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 UCP3P55916 312 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 LRRC10Q5BKY1 277 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 LYG2Q86SG7 212 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 GLYATL2Q8WU03 294 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 TIMD4Q96H15 378 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 CCL19Q99731 98 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 MALRD1Q5VYJ5 2156 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 TRGV10A0A0A0MS01 117 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 IGHV3-43A0A0B4J1X8 118 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 C9orf170A2RU37 121 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 L7N2F9 121 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 CGB3P0DN86 165 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 CGB7P0DN87 165 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 IGHV3-43DP0DP04 118 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 RPS2P15880 293 aaKnown RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 OMGP23515 440 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 GNRHRP30968 328 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 PIGPP57054 158 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 SUPT4H1P63272 117 aaKnown RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 LTC4SQ16873 150 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 PHLDA2Q53GA4 152 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 ZNF295-AS1Q8N0V1 137 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 C12orf45Q8N5I9 185 aaPredicted RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 EDARADDQ8WWZ3 215 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 RSRP1Q9BUV0 290 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 OR2S2Q9NQN1 319 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 SLC2A9Q9NRM0 540 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 CALYQ9NYX4 217 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 OPN4Q9UHM6 478 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 FBN2P35556 2912 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 CENPEQ02224 2701 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 OR2A4O95047 310 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 GIPP09681 153 aaPredicted RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 PPP1CCP36873 323 aaKnown RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 RPL31P62899 125 aaKnown RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 C17orf58Q2M2W7 97 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 ABCA11PQ4W5N1 156 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 COQ8AQ8NI60 647 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 CASTOR1Q8WTX7 329 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 H1FXQ92522 213 aaKnown RBP9.03□□□□□ -0.96
COL21A1-211ENST00000488912 RAB1CQ92928 201 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 OR2A7Q96R45 310 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 SLC5A7Q9GZV3 580 aa9.03□□□□□ -0.96
COL21A1-211ENST00000488912 ASH1LQ9NR48 2969 aaKnown RBP9.02□□□□□ -0.96
COL21A1-211ENST00000488912 CELSR2Q9HCU4 2923 aa9.02□□□□□ -0.96
COL21A1-211ENST00000488912 RAB19A4D1S5 217 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 S100A9P06702 114 aaKnown RBP9.02□□□□□ -0.97
COL21A1-211ENST00000488912 FBP1P09467 338 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 TMEM33P57088 247 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 HTD2P86397 168 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 SLC9A3R2Q15599 337 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 DHRS7BQ6IAN0 325 aaPredicted RBP9.02□□□□□ -0.97
COL21A1-211ENST00000488912 ALKAL2Q6UX46 152 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 STX12Q86Y82 276 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 OR10V1Q8NGI7 309 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 NINJ1Q92982 152 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.97
COL21A1-211ENST00000488912 PDCD10Q9BUL8 212 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 CCL28Q9NRJ3 127 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 LINC00312Q9Y6C7 94 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 KBTBD11-OT1A0A1B0GTJ5 212 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 hADV38S2A0JD32 116 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 CRYM-AS1A6NIL9 109 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 F2RL2O00254 374 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 HSD17B6O14756 317 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 IGHV4-39P01824 125 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 LUMP51884 338 aaPredicted RBP9.02□□□□□ -0.97
COL21A1-211ENST00000488912 C2orf68Q2NKX9 166 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 TMEM155Q4W5P6 130 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF841Q6ZN19 808 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF525Q8N782 197 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 RTN4IP1Q8WWV3 396 aaPredicted RBP9.02□□□□□ -0.97
COL21A1-211ENST00000488912 NRGNQ92686 78 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 CORO2AQ92828 525 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 CHIAQ9BZP6 476 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 PRR13Q9NZ81 148 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 MGAT4CQ9UBM8 478 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 CLN8Q9UBY8 286 aa9.02□□□□□ -0.97
COL21A1-211ENST00000488912 CSMD2Q7Z408 3487 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 DBX1A6NMT0 343 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 SFT2D2O95562 160 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 DUS4LO95620 317 aaKnown RBP9.01□□□□□ -0.97
COL21A1-211ENST00000488912 OR8U9P0C7N5 309 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 CD34P28906 385 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 S100A11P31949 105 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 LOXL3P58215 753 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 DEFA5Q01523 94 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 MEF2CQ06413 473 aaPredicted RBP9.01□□□□□ -0.97
COL21A1-211ENST00000488912 UTF1Q5T230 341 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms