RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 Q6ZS49 121 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 TIPARPQ7Z3E1 657 aaKnown RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 ZFP30Q9Y2G7 519 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 A0A0G2JMM0 328 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 A0A1W2PPB8 328 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 A0A1W2PRS3 328 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 KIR3DP1A8MWS1 328 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 SYNGR3O43761 229 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 OR7C1O76099 320 aaPredicted RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 NRASP01111 189 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 IL3RAP26951 378 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 YLPM1P49750 1951 aaKnown RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 TMEM183BQ1AE95 376 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 COL5A1-AS1Q5SY13 56 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 TEX43Q6ZNM6 134 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 OR4F5Q8NH21 305 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 FGFBP3Q8TAT2 258 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 GPR146Q96CH1 333 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 OR4F4Q96R69 305 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 PXMP4Q9Y6I8 212 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 FRYQ5TBA9 3013 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 M0R296 226 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 YPEL1O60688 119 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 Q0VFX4 171 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 RPP25LQ8N5L8 163 aaKnown RBP12.08□□□□□ -0.48
RER1-207ENST00000488353 PIGCQ92535 297 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 YPEL2Q96QA6 119 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 PARD6GQ9BYG4 376 aaPredicted RBP12.08□□□□□ -0.48
RER1-207ENST00000488353 CCL28Q9NRJ3 127 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 A0A0G2JRQ6 117 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 A0A0U1RQK1 487 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 ZNF320A2RRD8 509 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 SYNGR2O43760 224 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 NUPR1O60356 82 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 SP9P0CG40 484 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 IGKV1-13P0DP09 117 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 S100GP29377 79 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 GCH1P30793 250 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 MLF1P58340 268 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 RAC1P63000 192 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 PAFAH1B2P68402 229 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 BATFQ16520 125 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
RER1-207ENST00000488353 FBXW9Q5XUX1 488 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 PPP1R32Q7Z5V6 425 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 PSENENQ9NZ42 101 aa12.08□□□□□ -0.48
RER1-207ENST00000488353 FREM1Q5H8C1 2179 aa12.07□□□□□ -0.48
RER1-207ENST00000488353 PGLYRP1O75594 196 aaPredicted RBP12.07□□□□□ -0.48
RER1-207ENST00000488353 F2RP25116 425 aa12.07□□□□□ -0.48
RER1-207ENST00000488353 FAM78BQ5VT40 261 aa12.07□□□□□ -0.48
RER1-207ENST00000488353 NUFIP2Q7Z417 695 aaKnown RBP12.07□□□□□ -0.48
RER1-207ENST00000488353 CMTM2Q8TAZ6 248 aa12.07□□□□□ -0.48
RER1-207ENST00000488353 CT55Q8WUE5 264 aa12.07□□□□□ -0.48
RER1-207ENST00000488353 RIMS4Q9H426 269 aaPredicted RBP12.07□□□□□ -0.48
RER1-207ENST00000488353 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
RER1-207ENST00000488353 TCF21O43680 179 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TUSC2O75896 110 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 PSG4Q00888 419 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TDRG1Q3Y452 100 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TAF15Q92804 592 aaKnown RBP eCLIP12.06□□□□□ -0.484e-9■■□□□ 12.2
RER1-207ENST00000488353 SH2D2AQ9NP31 389 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
RER1-207ENST00000488353 CXCL13O43927 109 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 CBR3O75828 277 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 IGHV3-9P01782 118 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 SERPINE2P07093 398 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 SCTP09683 121 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 CD99P14209 185 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 FUT6P51993 359 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 SOX8P57073 446 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 CARD18P57730 90 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TPPP2P59282 170 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 COTL1Q14019 142 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 PLCXD3Q63HM9 321 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.06□□□□□ -0.48
RER1-207ENST00000488353 EXTL1Q92935 676 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 VAMP8Q9BV40 100 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TMEM38BQ9NVV0 291 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
RER1-207ENST00000488353 A0A1B0GUS0 222 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 CTXN2P0C2S0 81 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 CHRNA7P36544 502 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 PPP1CBP62140 327 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 TLE1Q04724 770 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 FOXL1Q12952 345 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 CEACAM16Q2WEN9 425 aa12.05□□□□□ -0.48
RER1-207ENST00000488353 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
RER1-207ENST00000488353 TMEM144Q7Z5S9 345 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms