RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SUPT4H1P63272 117 aaKnown RBP10.06□□□□□ -0.8
TRA2B-214ENST00000487615 PSG7Q13046 419 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 HFEQ30201 348 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 VMA21Q3ZAQ7 101 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 CT45A1Q5HYN5 189 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 BIVMQ86UB2 503 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 C1orf162Q8NEQ5 155 aaPredicted RBP10.06□□□□□ -0.8
TRA2B-214ENST00000487615 CT45A3Q8NHU0 189 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 ITLN1Q8WWA0 313 aa10.06□□□□□ -0.8
TRA2B-214ENST00000487615 CECR9P0C854 216 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 TMEM241Q24JQ0 296 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 STUMQ69YW2 141 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 EIF4E3Q8N5X7 224 aaKnown RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 LILRB1Q8NHL6 650 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 LSM10Q969L4 123 aaKnown RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 NEIL1Q96FI4 390 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 SNX22Q96L94 193 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 FKBP11Q9NYL4 201 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 ODAMA1E959 279 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 PCNX2A6NKB5 2137 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 CLDN14O95500 239 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 CELA3BP08861 270 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 MGST1P10620 155 aaKnown RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 IZUMO4Q1ZYL8 232 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 TMEM42Q69YG0 159 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 DRAM1Q8N682 238 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 C12orf57Q99622 126 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 VAX2Q9UIW0 290 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 FAM90A26D6RGX4 464 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 OR5G3P0C626 314 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 ID4P47928 161 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 KHDC3LQ587J8 217 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 H1FOOQ8IZA3 346 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 SPSB4Q96A44 273 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 LRFN3Q9BTN0 628 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 SH3BGRL3Q9H299 93 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 ZNF705GA8MUZ8 300 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 E9PLN8 166 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 NPBWR1P48145 328 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 TIGITQ495A1 244 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 MRGPRGQ86SM5 289 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 WDFY1Q8IWB7 410 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 GTF3AQ92664 365 aaKnown RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-214ENST00000487615 ACY3Q96HD9 319 aa10.05□□□□□ -0.8
TRA2B-214ENST00000487615 HPRT1P00492 218 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 GLIPR1P48060 266 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 GNB1P62873 340 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 CCL8P80075 99 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 CLEC12BQ2HXU8 276 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 PEAR1Q5VY43 1037 aaPredicted RBP10.04□□□□□ -0.8
TRA2B-214ENST00000487615 SAMD10Q9BYL1 202 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 SPRR3Q9UBC9 169 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 FAM90A27PA6NNH2 459 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 H3BQ15 152 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 WNT9BO14905 357 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 SS18L1O75177 396 aaPredicted RBP10.04□□□□□ -0.8
TRA2B-214ENST00000487615 SNRPEP62304 92 aaKnown RBP10.04□□□□□ -0.8
TRA2B-214ENST00000487615 TLE1Q04724 770 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 SLC35E4Q6ICL7 350 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 HEATR1Q9H583 2144 aaKnown RBP10.04□□□□□ -0.8
TRA2B-214ENST00000487615 F8VVB4 439 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 F8VWA3 439 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 SOX15O60248 233 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 OPN1MWP04001 364 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 CD3EP07766 207 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 OPN1MW2P0DN77 364 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 OPN1MW3P0DN78 364 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 BPIFB3P59826 476 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 PDZD11Q5EBL8 140 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 PCNTO95613 3336 aa10.04□□□□□ -0.8
TRA2B-214ENST00000487615 ZNF705FA8MVS1 300 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-214ENST00000487615 TSTD3H0UI37 97 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 CRYBA1P05813 215 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 ZNF705DP0CH99 300 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-214ENST00000487615 ZNF705BP0CI00 300 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-214ENST00000487615 FHITP49789 147 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 KIAA2026Q5HYC2 2103 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 CTXND1A0A1B0GTU2 59 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 IQCF6A8MYZ5 107 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 RHOBP62745 196 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 HGFACQ04756 655 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 C9orf106Q8NAJ2 232 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 C1orf147Q96MC9 270 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-214ENST00000487615 ABHD14AQ9BUJ0 271 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 MS4A5Q9H3V2 200 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 MANBALQ9NQG1 85 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 IGSF23A1L1A6 192 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 LDLRAD3Q86YD5 345 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 RNF138Q8WVD3 245 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 TRBV6-7A0A0A0MS04 114 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 IGKV1D-13A0A0B4J2D9 117 aa10.03□□□□□ -0.8
TRA2B-214ENST00000487615 RAB29O14966 203 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms