RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SIRT7Q9NRC8 400 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 OR14J1Q9UGF5 321 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 A0A1W2PPE3 182 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 CXorf65A6NEN9 183 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 IFNA17P01571 189 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 SERF2P84101 59 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 FOXF2Q12947 444 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 MSMO1Q15800 293 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 LRRC75BQ2VPJ9 315 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 MBNL2Q5VZF2 373 aaKnown RBP21.94■■□□□ 1.1
HLA-C-208ENST00000487245 PRR18Q8N4B5 295 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 CYB561D1Q8N8Q1 229 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 TCEAL7Q9BRU2 100 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 ZNF71Q9NQZ8 489 aaPredicted RBP21.94■■□□□ 1.1
HLA-C-208ENST00000487245 KCNS2Q9ULS6 477 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 UBE2KP61086 200 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 IZUMO4Q1ZYL8 232 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 HAPLN4Q86UW8 402 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 ZNF610Q8N9Z0 462 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 CISD1Q9NZ45 108 aaKnown RBP21.94■■□□□ 1.1
HLA-C-208ENST00000487245 MMP24Q9Y5R2 645 aa21.94■■□□□ 1.1
HLA-C-208ENST00000487245 TNFSF13O75888 250 aa21.93■■□□□ 1.1
HLA-C-208ENST00000487245 CGAP01215 116 aa21.93■■□□□ 1.1
HLA-C-208ENST00000487245 ARL16Q0P5N6 197 aa21.93■■□□□ 1.1
HLA-C-208ENST00000487245 ACP7Q6ZNF0 438 aa21.93■■□□□ 1.1
HLA-C-208ENST00000487245 BEND4Q6ZU67 534 aa21.93■■□□□ 1.1
HLA-C-208ENST00000487245 BHLHA15Q7RTS1 189 aaPredicted RBP21.93■■□□□ 1.1
HLA-C-208ENST00000487245 STARD4Q96DR4 205 aa21.93■■□□□ 1.1
HLA-C-208ENST00000487245 MBD3L4A6NDZ8 208 aaPredicted RBP21.92■■□□□ 1.1
HLA-C-208ENST00000487245 MBD3L3A6NE82 208 aaPredicted RBP21.92■■□□□ 1.1
HLA-C-208ENST00000487245 OOEPA6NGQ2 149 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 MBD3L5A6NJ08 208 aaPredicted RBP21.92■■□□□ 1.1
HLA-C-208ENST00000487245 TAGLN2P37802 199 aaKnown RBP21.92■■□□□ 1.1
HLA-C-208ENST00000487245 ADAM5Q6NVV9 412 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 IGFL3Q6UXB1 125 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 MBD3L2Q8NHZ7 208 aaPredicted RBP21.92■■□□□ 1.1
HLA-C-208ENST00000487245 GALMQ96C23 342 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 NIPSNAP3BQ9BS92 247 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 RPRMQ9NS64 109 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 DKK4Q9UBT3 224 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 B4DEV8 164 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 IFNL4K9M1U5 179 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 PMS2P11Q13670 270 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 ZNF645Q8N7E2 425 aa21.92■■□□□ 1.1
HLA-C-208ENST00000487245 IGHV2OR16-5A0A0B4J2B6 119 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 A0A1B0GWJ7 208 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 OR5H1A6NKK0 313 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 AP4M1O00189 453 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 PSPNO60542 156 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 IAPPP10997 89 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 DLK1P80370 383 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 EIF4EBP1Q13541 118 aaPredicted RBP21.91■■□□□ 1.1
HLA-C-208ENST00000487245 TAAR6Q96RI8 345 aa21.91■■□□□ 1.1
HLA-C-208ENST00000487245 METTL15P1P0C7V9 234 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 P0C879 139 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 FABP9Q0Z7S8 132 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 PINX1Q96BK5 328 aaKnown RBP21.9■■□□□ 1.1
HLA-C-208ENST00000487245 RSG1Q9BU20 258 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 TIMM9Q9Y5J7 89 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 PTPRBP23467 1997 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 IGHV1-18A0A0C4DH31 117 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 IGHV3-64DA0A0J9YX35 117 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 WDR82Q6UXN9 313 aa21.9■■□□□ 1.1
HLA-C-208ENST00000487245 WDR61Q9GZS3 305 aaKnown RBP21.9■■□□□ 1.1
HLA-C-208ENST00000487245 OPN3Q9H1Y3 402 aaPredicted RBP21.9■■□□□ 1.1
HLA-C-208ENST00000487245 S100A9P06702 114 aaKnown RBP21.89■■□□□ 1.09
HLA-C-208ENST00000487245 BCL2P10415 239 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF16P17020 682 aaPredicted RBP21.89■■□□□ 1.09
HLA-C-208ENST00000487245 IL2RGP31785 369 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 FABP6P51161 128 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 SMIM21Q3B7S5 101 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF787Q6DD87 383 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 TMEM14EPQ6UXP3 125 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 Q6ZR03 302 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF826PQ6ZT77 177 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 FGFRL1Q8N441 504 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 P2RX4Q99571 388 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 OTOGLQ3ZCN5 2332 aa21.89■■□□□ 1.09
HLA-C-208ENST00000487245 WNT9BO14905 357 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 FBP1P09467 338 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 OR3A1P47881 315 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 GLIPR1P48060 266 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 CEBPDP49716 269 aaPredicted RBP21.88■■□□□ 1.09
HLA-C-208ENST00000487245 B2MP61769 119 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 CENPVQ7Z7K6 275 aaPredicted RBP21.88■■□□□ 1.09
HLA-C-208ENST00000487245 TCTEX1D1Q8N7M0 179 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 HSPB7Q9UBY9 170 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 RTP5Q14D33 572 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF726P1Q15940 193 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 TMEM41BQ5BJD5 291 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 SLC25A15Q9Y619 301 aa21.88■■□□□ 1.09
HLA-C-208ENST00000487245 C12orf77C9JDV5 145 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 PNRC1Q12796 327 aaPredicted RBP21.87■■□□□ 1.09
HLA-C-208ENST00000487245 PRAMEF6Q5VXH4 476 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 FAM90A2PQ658T7 463 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 LILRB2Q8N423 598 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 OR1L1Q8NH94 360 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 UBALD1Q8TB05 177 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 TCTEX1D2Q8WW35 142 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 LURAP1Q96LR2 239 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms