RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 DEGS1O15121 323 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC22A1O15245 554 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 ARL6IP5O75915 188 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 ECDO95905 644 aaPredicted RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 CD36P16671 472 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 SERPINA2P20848 420 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 GALP22466 123 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 GADD45AP24522 165 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 FGF9P31371 208 aaPredicted RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 TGFBR1P36897 503 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 OR3A1P47881 315 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 DLX1P56177 255 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 OR10A3P58181 314 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 QRFPP83859 136 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 PRB3Q04118 309 aaPredicted RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 GAGE5Q13069 117 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 GAGE6Q13070 117 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 ZNF273Q14593 569 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC22A6Q4U2R8 563 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 KLF17Q5JT82 389 aaPredicted RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 SPIN3Q5JUX0 258 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 GLT8D1Q68CQ7 371 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 OR10K2Q6IF99 312 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 TRAT1Q6PIZ9 186 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 OSR2Q8N2R0 312 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 BPIFB2Q8N4F0 458 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 Q8N7P7 452 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 TPRX1Q8N7U7 411 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 ASCC1Q8N9N2 400 aaKnown RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 TMEM185AQ8NFB2 350 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 OR4M2Q8NGB6 313 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 C8orf46Q8TAG6 207 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 SETD6Q8TBK2 473 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 H1FXQ92522 213 aaKnown RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 C17orf77Q96MU5 243 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 TBX15Q96SF7 602 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 UQCC2Q9BRT2 126 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 BEX2Q9BXY8 128 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 FAM192AQ9GZU8 254 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 BANF2Q9H503 90 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 C19orf12Q9NSK7 152 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 STUB1Q9UNE7 303 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 ST3GAL6Q9Y274 331 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 MRPS28Q9Y2Q9 187 aaKnown RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 SOX21Q9Y651 276 aaPredicted RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 IGHV3OR16-10A0A075B7F0 116 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A1W2PPQ1 181 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 NKX6-3A6NJ46 265 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 J3QLI3 93 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC33A1O00400 549 aaPredicted RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 ENSAO43768 121 aaKnown RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 ZNF780AO75290 641 aaPredicted RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 IGHV4-38-2P0DP08 117 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 GTF2F2P13984 249 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 ZNF44P15621 663 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 GABRR1P24046 479 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 HTR2CP28335 458 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 GLIPR1P48060 266 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 HOXA1P49639 335 aaPredicted RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 CAPZA1P52907 286 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 CLDN12P56749 244 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 RBM11P57052 281 aaKnown RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 RPL31P62899 125 aaKnown RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 AESQ08117 197 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 UNC119Q13432 240 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 P2RY14Q15391 338 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 TAF9Q16594 264 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 C2orf76Q3KRA6 126 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 CHRFAM7AQ494W8 412 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 NHLRC3Q5JS37 347 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 PRR27Q6MZM9 219 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 BTNL3Q6UXE8 466 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 DMBX1Q8NFW5 382 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 OR51D1Q8NGF3 324 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 OR5D13Q8NGL4 314 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 PLPPR1Q8TBJ4 325 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 SSMEM1Q8WWF3 244 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 UPRTQ96BW1 309 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 MOB3AQ96BX8 217 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 CPNE2Q96FN4 548 aaPredicted RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 SGK494Q96LW2 274 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 S100A13Q99584 98 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 SIRPDQ9H106 197 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 SLITRK2Q9H156 845 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 PPA2Q9H2U2 334 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 Q9N2K0 584 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 EXOSC4Q9NPD3 245 aaKnown RBP4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 GHRLQ9UBU3 117 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 GLS2Q9UI32 602 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 SSR3Q9UNL2 185 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 V9GY05 133 aa4.99□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A0A6YYD4 124 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A0B4J203 849 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 LOC100506127A0A0U1RQW1 187 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CENPVL3A0A0U1RRI6 287 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 SMIM30A4D0T7 59 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 IFITM5A6NNB3 132 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 C17orf98A8MV24 154 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 TMEM14DPA8MWL7 114 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC17A2O00624 439 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms