RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 OR2V1Q8NHB1 315 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 GPR35Q9HC97 309 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 ATP23Q9Y6H3 246 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 TRAV38-1A0A0B4J264 116 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 A8MWP6 167 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 UMODP07911 640 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 FGF7P21781 194 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 UCP3P55916 312 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 SRPXP78539 464 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 TRIM61Q5EBN2 209 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 TMEM183AQ8IXX5 376 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 PPIAL4AQ9Y536 164 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 IGLV3-12A0A075B6K2 115 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 ELOA3CA0A087WX78 387 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 DFFBO76075 338 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 SRFP11831 508 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 ZNF25P17030 456 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 RAC1P63000 192 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 HIST1H3AP68431 136 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 PAX5Q02548 391 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 LYSMD4Q5XG99 296 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 TUSC5Q8IXB3 177 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 H1FOOQ8IZA3 346 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 PATZ1Q9HBE1 687 aaKnown RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 VAX2Q9UIW0 290 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 EXPH5Q8NEV8 1989 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 OR6C6A6NF89 314 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 ETV2O00321 342 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 MRPL33O75394 65 aaKnown RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 NUBP1P53384 320 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 MEF2BQ02080 365 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-211ENST00000486901 DEPPQ9NTK1 212 aa10.51□□□□□ -0.73
HSPG2-211ENST00000486901 DVL1O14640 695 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 VAMP5O95183 116 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 C1QTNF9P0C862 333 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 CEACAM6P40199 344 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 MPLP40238 635 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 JOSD1Q15040 202 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-211ENST00000486901 SNHG12Q9BXW3 62 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 CISD1Q9NZ45 108 aaKnown RBP10.5□□□□□ -0.73
HSPG2-211ENST00000486901 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 A0A1B0GW64 132 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OPN1MWP04001 364 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 P04436 131 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 GRPP07492 148 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OPN1MW2P0DN77 364 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OPN1MW3P0DN78 364 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 EDDM3BP56851 147 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 SSTP61278 116 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 SLC35B1P78383 322 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 FFAR4Q5NUL3 377 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 WDR74Q6RFH5 385 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OR2W1Q9Y3N9 320 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 NAPSAO96009 420 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 RAC3P60763 192 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 LINC00696Q6ZRV3 163 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OR10G4Q8NGN3 311 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OR10G9Q8NGN4 311 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 OR10G7Q8NGN6 311 aa10.5□□□□□ -0.73
HSPG2-211ENST00000486901 ZG16O60844 167 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 GYPAP02724 150 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 CST2P09228 141 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 ATP5G3P48201 142 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 TMEM42Q69YG0 159 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 TAF15Q92804 592 aaKnown RBP eCLIP10.49□□□□□ -0.73
HSPG2-211ENST00000486901 FAM103A1Q9BTL3 118 aaKnown RBP10.49□□□□□ -0.73
HSPG2-211ENST00000486901 CHRNA10Q9GZZ6 450 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 OR51I2Q9H344 312 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 DEGS1O15121 323 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 LAMTOR5O43504 91 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 SLC10A1Q14973 349 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 ZNF114Q8NC26 417 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 IGHV1-45A0A0A0MS14 117 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 LOC102725191A0A1B0GVB3 256 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 H0Y980 276 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 PFN1P07737 140 aaKnown RBP10.49□□□□□ -0.73
HSPG2-211ENST00000486901 CEACAM1P13688 526 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 GCH1P30793 250 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 TFPI2P48307 235 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 PAM16Q9Y3D7 125 aa10.49□□□□□ -0.73
HSPG2-211ENST00000486901 NCKAP5O14513 1909 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 TNCP24821 2201 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 IGLV3-32A0A0A0MS00 114 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 CBR3O75828 277 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 DKK1O94907 266 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 NDUFB4O95168 129 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 COX6A1P12074 109 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 S100GP29377 79 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 PSMB3P49720 205 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 FGF12P61328 243 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 ALKBH6Q3KRA9 238 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 GGNQ86UU5 652 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 OR5D13Q8NGL4 314 aa10.48□□□□□ -0.73
HSPG2-211ENST00000486901 RAB24Q969Q5 203 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms