RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C1orf185Q5T7R7 199 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 STUMQ69YW2 141 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 ACY3Q96HD9 319 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 SAP30LQ9HAJ7 183 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-216ENST00000486741 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 LAMP3Q9UQV4 416 aa11.26□□□□□ -0.61
HMGN1-216ENST00000486741 CNIH1O95406 144 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 IL18BPO95998 194 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 RPL19P84098 196 aaKnown RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 SLX1AQ9BQ83 275 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 PKIBQ9C010 78 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 DOCK11Q5JSL3 2073 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 IL24Q13007 206 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 ZCCHC24Q8N2G6 241 aaKnown RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 RBMXL3Q8N7X1 1067 aaKnown RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 ZNF251Q9BRH9 671 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 MUC22E2RYF6 1773 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 TMEM210A6NLX4 147 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 CYB5R3P00387 301 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 APELAP0DMC3 54 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 GZMHP20718 246 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 COX7A1P24310 79 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 OTX1P32242 354 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-216ENST00000486741 FGFRL1Q8N441 504 aa11.25□□□□□ -0.61
HMGN1-216ENST00000486741 CA11O75493 328 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 SPP1P10451 314 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 NAAAQ02083 359 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 GABRA6Q16445 453 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 MALSU1Q96EH3 234 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 OR6C3Q9NZP0 311 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 IGF2RP11717 2491 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 IGKV3D-15A0A087WSY6 115 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 OR7C2O60412 319 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 AWAT1Q58HT5 328 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 ZNF561Q8N587 486 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 MEGF10Q96KG7 1140 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 ATP5SQ99766 215 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 LRRC10Q5BKY1 277 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 ATRAIDQ6UW56 229 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 OR10D4PQ8NGN7 298 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 PLPPR1Q8TBJ4 325 aa11.24□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A10PA6NDY2 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A18PA6NE21 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A16PA6NEW6 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 WIPF3A6NGB9 483 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A20PA6NIJ5 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A8PA6NJQ4 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A7PA6NKC0 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A12PA8MX19 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A5PA8MXJ8 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A23PA8MXZ1 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A15PP0C7V4 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A13PP0C7W8 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A14PP0C7W9 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM90A24PP0C7X0 464 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SULT1A1P50225 295 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-216ENST00000486741 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 DRAM1Q8N682 238 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SSMEM1Q8WWF3 244 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 NRIP2Q9BQI9 281 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 H0Y980 276 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 LINC00596Q86U02 117 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1B0GU03 582 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 CRYBA1P05813 215 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 OR5G3P0C626 314 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 DEFA4P12838 97 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 NPBWR1P48145 328 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SULT1A2P50226 295 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 MOB3BQ86TA1 216 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 UBAC2Q8NBM4 344 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 TVP23CQ96ET8 276 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
HMGN1-216ENST00000486741 H7BYZ3 331 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 FAM87AP0C7U9 286 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SEC11BP0C7V7 166 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SSTP61278 116 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-216ENST00000486741 PARD6AQ9NPB6 346 aa11.23□□□□□ -0.61
HMGN1-216ENST00000486741 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms