RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RCC2Q9P258 522 aaKnown RBP6□□□□□ -1.45
XRN1-212ENST00000486211 GNG12Q9UBI6 72 aa6□□□□□ -1.45
XRN1-212ENST00000486211 DMRT1Q9Y5R6 373 aa6□□□□□ -1.45
XRN1-212ENST00000486211 TMEM213A2RRL7 107 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 RPP14O95059 124 aaKnown RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 FADS2O95864 444 aaKnown RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 MT-ND2P03891 347 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 MT-ND4P03905 459 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 DBTP11182 482 aaKnown RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 RPL35AP18077 110 aaKnown RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 ALKBH1Q13686 389 aaKnown RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 GINS1Q14691 196 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 GNMTQ14749 295 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 FXYD3Q14802 87 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 PSG5Q15238 335 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 MICAQ29983 383 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 C1orf134Q5TEV5 83 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 SSX6Q7RTT6 188 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 PRSS35Q8N3Z0 413 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 OR11H2Q8NH07 326 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 OR10AC1Q8NH08 325 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 OR1L1Q8NH94 360 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 GHSRQ92847 366 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 HOPXQ9BPY8 73 aaPredicted RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 HRH4Q9H3N8 390 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 IFT22Q9H7X7 185 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 METTL1Q9UBP6 276 aaKnown RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 UBQLN2Q9UHD9 624 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 ZNF230Q9UIE0 474 aaPredicted RBP5.99□□□□□ -1.45
XRN1-212ENST00000486211 MAGEL2Q9UJ55 1249 aa5.99□□□□□ -1.45
XRN1-212ENST00000486211 SAA2-SAA4A0A096LPE2 208 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.98□□□□□ -1.45
XRN1-212ENST00000486211 TRAV10A0A0B4J240 114 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 H3BN98 237 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 HBZP02008 142 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 CD74P04233 296 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 SAA2P0DJI9 122 aaPredicted RBP5.98□□□□□ -1.45
XRN1-212ENST00000486211 TMEM225BP0DP42 221 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 ACTR3P61158 418 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 RPS16P62249 146 aaKnown RBP5.98□□□□□ -1.45
XRN1-212ENST00000486211 ADARB1P78563 741 aaKnown RBP5.98□□□□□ -1.45
XRN1-212ENST00000486211 ZSCAN26Q16670 478 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 TMEM30BQ3MIR4 351 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 ODF3L2Q3SX64 289 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 MORN2Q502X0 79 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 ZNF497Q6ZNH5 498 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 Q6ZTC4 211 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 OR1L6Q8NGR2 347 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 OR13C9Q8NGT0 318 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 ANP32BQ92688 251 aaKnown RBP5.98□□□□□ -1.45
XRN1-212ENST00000486211 FGGYQ96C11 551 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 CNN2Q99439 309 aaKnown RBP5.98□□□□□ -1.45
XRN1-212ENST00000486211 SIKE1Q9BRV8 207 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 ABHD14AQ9BUJ0 271 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 ADI1Q9BV57 179 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 TMBIM4Q9HC24 238 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 MRGBPQ9NV56 204 aa5.98□□□□□ -1.45
XRN1-212ENST00000486211 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 TRAV25A0A0B4J276 109 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 FAM90A23PA8MXZ1 464 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 H0YJW9 148 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 NDUFAB1O14561 156 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 SLC22A1O15245 554 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 SPINT2O43291 252 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 EDF1O60869 148 aaKnown RBP5.97□□□□□ -1.45
XRN1-212ENST00000486211 HLA-AP01891 365 aaKnown RBP5.97□□□□□ -1.45
XRN1-212ENST00000486211 HMGN1P05114 100 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 RBMY1CP0DJD4 496 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 CT45A6P0DMU7 189 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 CT45A5P0DMU8 189 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 CT45A7P0DMV0 189 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 HLA-DMBP28068 263 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 CDK5Q00535 292 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 EXOSC2Q13868 293 aaKnown RBP5.97□□□□□ -1.45
XRN1-212ENST00000486211 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 BTNL8Q6UX41 500 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 GLDNQ6ZMI3 551 aaPredicted RBP5.97□□□□□ -1.45
XRN1-212ENST00000486211 NR2C2APQ86WQ0 139 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 SLC35F2Q8IXU6 374 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 PRR18Q8N4B5 295 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 OR2C3Q8N628 320 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 UXS1Q8NBZ7 420 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 PXT1Q8NFP0 134 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 GALNT14Q96FL9 552 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 ADGRL4Q9HBW9 690 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 AKIP1Q9NQ31 210 aa5.97□□□□□ -1.45
XRN1-212ENST00000486211 OR5H14A6NHG9 310 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 A8MWP6 167 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 PPP5D1E7EU14 171 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 ZNF670-ZNF695F2Z2N8 137 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 AIPO00170 330 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 SULT1B1O43704 296 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 SNX3O60493 162 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 GMNNO75496 209 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 RBBP9O75884 186 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 OR2C1O95371 312 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 UBCP0CG48 685 aaKnown RBP5.96□□□□□ -1.46
XRN1-212ENST00000486211 ZNF20P17024 532 aa5.96□□□□□ -1.46
XRN1-212ENST00000486211 PPP1CCP36873 323 aaKnown RBP5.96□□□□□ -1.46
XRN1-212ENST00000486211 RHOGP84095 191 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms