RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 BVESQ8NE79 360 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 ZFAND1Q8TCF1 268 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 TNFRSF14Q92956 283 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 TMEM133Q9H2Q1 129 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 SDHAF2Q9NX18 166 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 C14orf166Q9Y224 244 aaKnown RBP11.87□□□□□ -0.51
LRIF1-202ENST00000485275 ZFHX3Q15911 3703 aa11.87□□□□□ -0.51
LRIF1-202ENST00000485275 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 GPR31O00270 319 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 ITGB1BP1O14713 200 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 FOXH1O75593 365 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 HLA-AP01891 365 aaKnown RBP11.86□□□□□ -0.51
LRIF1-202ENST00000485275 KLRD1Q13241 179 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 RPL39P5Q59GN2 51 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 PRSS57Q6UWY2 283 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-202ENST00000485275 EDARADDQ8WWZ3 215 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 RBMXL1Q96E39 390 aaKnown RBP11.86□□□□□ -0.51
LRIF1-202ENST00000485275 ZNF486Q96H40 463 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-202ENST00000485275 SCGB3A2Q96PL1 93 aa11.86□□□□□ -0.51
LRIF1-202ENST00000485275 RBM7Q9Y580 266 aaKnown RBP11.86□□□□□ -0.51
LRIF1-202ENST00000485275 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 IGHV2-26A0A0B4J1V2 119 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 M0R1W7 72 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 PRAF2O60831 178 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 PGLYRP1O75594 196 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-202ENST00000485275 RGS11O94810 467 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-202ENST00000485275 VAMP1P23763 118 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 BCAP31P51572 246 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 RND3P61587 244 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
LRIF1-202ENST00000485275 Q3ZCU0 254 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-202ENST00000485275 LYG2Q86SG7 212 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 ZNF596Q8TC21 504 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 FAHD2AQ96GK7 314 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 C1orf159Q96HA4 380 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 OR51J1Q9H342 316 aa11.85□□□□□ -0.51
LRIF1-202ENST00000485275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■□□□□ 10.7
LRIF1-202ENST00000485275 A0A1W2PPH5 198 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 COX7A1P24310 79 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 CD34P28906 385 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 TAS2R31P59538 309 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 SLC9A3R2Q15599 337 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 C2orf68Q2NKX9 166 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 ANKRD55Q3KP44 614 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 SP6Q3SY56 376 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 LDLRAD2Q5SZI1 272 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 VMO1Q7Z5L0 202 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 ABHD12Q8N2K0 398 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 ZNF431Q8TF32 576 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-202ENST00000485275 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 REG4Q9BYZ8 158 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 NAA60Q9H7X0 242 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 INSIG2Q9Y5U4 225 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 LINC00473A8K010 186 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 J3QR06 171 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 MPPED1O15442 326 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 SFT2D2O95562 160 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 IGLV1-47P01700 117 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 OR5AC1P0C628 307 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 DVL1P1P54792 670 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-202ENST00000485275 BRWD1-AS2P59051 145 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-202ENST00000485275 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 LPCAT3Q6P1A2 487 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 LYG1Q8N1E2 194 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 CIARTQ8N365 385 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-202ENST00000485275 OR51H1Q8NH63 302 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 CASTOR1Q8WTX7 329 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 METTL8Q9H825 291 aaKnown RBP11.84□□□□□ -0.51
LRIF1-202ENST00000485275 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
LRIF1-202ENST00000485275 SNRPGP15A8MWD9 76 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 CREBL2O60519 120 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-202ENST00000485275 MSMBP08118 114 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-202ENST00000485275 PRTN3P24158 256 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 GPR12P47775 334 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 CD300CQ08708 224 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 PDZD9Q8IXQ8 264 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 PNKDQ8N490 385 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 DRAXINQ8NBI3 349 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-202ENST00000485275 OR11H7Q8NGC8 314 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 LHFPL5Q8TAF8 219 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 CHAC2Q8WUX2 184 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 DMRTB1Q96MA1 342 aa11.83□□□□□ -0.52
LRIF1-202ENST00000485275 UNKLQ9H9P5 680 aaKnown RBP11.83□□□□□ -0.52
LRIF1-202ENST00000485275 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms