RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 FXYD6Q9H0Q3 95 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 C5orf66Q9H5L9 145 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 METTL8Q9H825 291 aaKnown RBP11.48□□□□□ -0.57
SMAD9-204ENST00000483941 PIPOXQ9P0Z9 390 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 KPTNQ9Y664 436 aa11.48□□□□□ -0.57
SMAD9-204ENST00000483941 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 C7orf66A4D0T2 115 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 VGLL3A8MV65 326 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 TOR1AO14656 332 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 FCN3O75636 299 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 CCL3L1P16619 93 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 ANXA7P20073 488 aaKnown RBP11.47□□□□□ -0.57
SMAD9-204ENST00000483941 OMGP23515 440 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 IL3RAP26951 378 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 GNRHRP30968 328 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 DLX6P56179 175 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 SRPXP78539 464 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 DHODHQ02127 395 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 PRAMEF5Q5TYX0 476 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 FGFRL1Q8N441 504 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 TCTEX1D1Q8N7M0 179 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 OR13D1Q8NGV5 346 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 UBALD1Q8TB05 177 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 RTN4IP1Q8WWV3 396 aaPredicted RBP11.47□□□□□ -0.57
SMAD9-204ENST00000483941 MRGPRFQ96AM1 343 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 PHB2Q99623 299 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 RTBDNQ9BSG5 229 aaPredicted RBP11.47□□□□□ -0.57
SMAD9-204ENST00000483941 ABHD14AQ9BUJ0 271 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 HEXA-AS1Q9H8Q6 139 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 SLC2A9Q9NRM0 540 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 ONECUT1Q9UBC0 465 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 KCNS2Q9ULS6 477 aa11.47□□□□□ -0.57
SMAD9-204ENST00000483941 MALRD1Q5VYJ5 2156 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 C22orf46C9J442 243 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 RAB29O14966 203 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 SSNA1O43805 119 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 IFNA2P01563 188 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 HLA-AP01891 365 aaKnown RBP11.46□□□□□ -0.57
SMAD9-204ENST00000483941 TRAPPC2P0DI81 140 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 TRAPPC2BP0DI82 140 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 GATA3P23771 443 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 CD34P28906 385 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 GPR12P47775 334 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 KRTAP1-1Q07627 177 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 BAMBIQ13145 260 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 CATR1Q13166 79 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 ZNF626Q68DY1 528 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 LINC00311Q8N616 119 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 OR9G1Q8NH87 305 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 COQ8AQ8NI60 647 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
SMAD9-204ENST00000483941 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 S1PR3Q99500 378 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 TMEM133Q9H2Q1 129 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 OR51J1Q9H342 316 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 ALG5Q9Y673 324 aa11.46□□□□□ -0.57
SMAD9-204ENST00000483941 CR1P17927 2039 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 A0A0A6YYJ9 748 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 A0A0B4J2A0 478 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 IGHV4-61A0A0C4DH41 118 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 IGHV2-70DA0A0C4DH43 119 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 MEX3AA1L020 520 aaKnown RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 CRYM-AS1A6NIL9 109 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 B4DSR2 109 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 HSD17B6O14756 317 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 MPPED1O15442 326 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 SFT2D2O95562 160 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 DUS4LO95620 317 aaKnown RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 VAMP1P23763 118 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 PRTN3P24158 256 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 BCAP31P51572 246 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 CBX3Q13185 183 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 DHRS2Q13268 280 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 GNMTQ14749 295 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 NCR3LG1Q68D85 454 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 ZNF66Q6ZN08 573 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 SLC25A48Q6ZT89 311 aaKnown RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 GALNT14Q96FL9 552 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 ADTRPQ96IZ2 230 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 HSD17B10Q99714 261 aaKnown RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 SUCNR1Q9BXA5 334 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 BEX2Q9BXY8 128 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 MED28Q9H204 178 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 OR2D2Q9H210 308 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 UNKLQ9H9P5 680 aaKnown RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 BEX1Q9HBH7 125 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 CCL28Q9NRJ3 127 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 SHPKQ9UHJ6 478 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 PSG11Q9UQ72 335 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms