RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 MEF2CQ06413 473 aaPredicted RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 TFF3Q07654 80 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 AESQ08117 197 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ATXN7L3Q14CW9 347 aaPredicted RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 IAH1Q2TAA2 248 aaPredicted RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 GGNBP1Q5YKI7 109 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 STUMQ69YW2 141 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF818PQ6ZRF7 136 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 TBC1D26Q86UD7 250 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 SLC51BQ86UW2 128 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 OR52M1Q8NGK5 317 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 SECTM1Q8WVN6 248 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 EDARADDQ8WWZ3 215 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 PHYHIPLQ96FC7 376 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 PLPPR2Q96GM1 343 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 OR10C1Q96KK4 312 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 YPEL2Q96QA6 119 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 SPIN2AQ99865 258 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 SPIN2BQ9BPZ2 258 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 GSX2Q9BZM3 304 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF665Q9H7R5 613 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 PLEKHF2Q9H8W4 249 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 PLEKHA2Q9HB19 425 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 CCL28Q9NRJ3 127 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 RDH8Q9NYR8 311 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 CISD1Q9NZ45 108 aaKnown RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 KAAG1Q9UBP8 84 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 UBE2J1Q9Y385 318 aaPredicted RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 RNF115Q9Y4L5 304 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 MAB21L2Q9Y586 359 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PPIAL4EA0A075B759 164 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 IGHV3-64DA0A0J9YX35 117 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 KBTBD11-OT1A0A1B0GTJ5 212 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 A0A1B0GU03 582 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 RNF222A6NCQ9 220 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 FAM90A27PA6NNH2 459 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 E5RGE8 158 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PPIAL4DF5H284 164 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 TMEM178BH3BS89 294 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 SIGLEC5O15389 551 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ST8SIA3O43173 380 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ATG12O94817 140 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF205O95201 554 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 GOSR1O95249 250 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 HOXB5P09067 269 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PPIAL4FP0DN26 164 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 S100A1P23297 94 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 LOXP28300 417 aaPredicted RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 GABRA2P47869 451 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 GLIPR1P48060 266 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PPOXP50336 477 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ARHGDIBP52566 201 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 AP2S1P53680 142 aaPredicted RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 EIF5AP63241 154 aaKnown RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ID3Q02535 119 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 KRTAP1-1Q07627 177 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 SP6Q3SY56 376 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 Q3ZCU0 254 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF672Q499Z4 452 aaPredicted RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PHLDA2Q53GA4 152 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 SPRNQ5BIV9 151 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 GPR157Q5UAW9 335 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 TMEM268Q5VZI3 342 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 LYZL2Q7Z4W2 148 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF695Q8IW36 515 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 FAM219AQ8IW50 185 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 SELENOHQ8IZQ5 122 aaKnown RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 FAM71E2Q8N5Q1 922 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF645Q8N7E2 425 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 OR8H1Q8NGG4 311 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 OR1L1Q8NH94 360 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 LINC01560Q8TB33 94 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 CD300LFQ8TDQ1 290 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 IL1F10Q8WWZ1 152 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 RBPMSQ93062 196 aaKnown RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 LSM10Q969L4 123 aaKnown RBP4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ARL11Q969Q4 196 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 AQP10Q96PS8 301 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 TP53RKQ96S44 253 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 AGMATQ9BSE5 352 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 KRTAP3-3Q9BYR6 98 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 KRTAP3-2Q9BYR7 98 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 ARL6Q9H0F7 186 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 SAP30LQ9HAJ7 183 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 OR2S2Q9NQN1 319 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 COA4Q9NYJ1 87 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 TAS2R3Q9NYW6 316 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 LPAR3Q9UBY5 353 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 CLN8Q9UBY8 286 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 CACFD1Q9UGQ2 172 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 JPT1Q9UK76 154 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 NSG2Q9Y328 171 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PPIAL4AQ9Y536 164 aa4.49□□□□□ -1.69
COL17A1-206ENST00000483876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 PLCE1Q9P212 2302 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 TRGV10A0A0A0MS01 117 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 KANTRA0A1W2PQU2 76 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms