RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 AIPO00170 330 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 OVOL1O14753 267 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 SPINT2O43291 252 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ORC5O43913 435 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF780AO75290 641 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-207ENST00000483407 FADS2O95864 444 aaKnown RBP4.56□□□□□ -1.68
CSDE1-207ENST00000483407 IGF1P05019 195 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 CD2P06729 351 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 RASSF2P50749 326 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 GBX2P52951 348 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-207ENST00000483407 SNRPGP62308 76 aaKnown RBP4.56□□□□□ -1.68
CSDE1-207ENST00000483407 PPP3R1P63098 170 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF616Q08AN1 781 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 MPV17LQ2QL34 196 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 TMEM30BQ3MIR4 351 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 NHLRC3Q5JS37 347 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 SLC25A30Q5SVS4 291 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ATAD3CQ5T2N8 411 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 C1orf146Q5VVC0 180 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ASCL4Q6XD76 172 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 LHFPL3Q86UP9 236 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 FAM71E2Q8N5Q1 922 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 TMEM104Q8NE00 496 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 OR1N2Q8NGR9 330 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 OR52N1Q8NH53 320 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ST6GALNAC6Q969X2 333 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 RITA1Q96K30 269 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 PDCD1LG2Q9BQ51 273 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 HSPB9Q9BQS6 159 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 SPACA1Q9HBV2 294 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ISYNA1Q9NPH2 558 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 PLSCR3Q9NRY6 295 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 IL36GQ9NZH8 169 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 GNG12Q9UBI6 72 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 PEMTQ9UBM1 199 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 TRAPPC2LQ9UL33 140 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 ING4Q9UNL4 249 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 VSIG4Q9Y279 399 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 EXOGQ9Y2C4 368 aaKnown RBP4.56□□□□□ -1.68
CSDE1-207ENST00000483407 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 DSCAML1Q8TD84 2053 aa4.56□□□□□ -1.68
CSDE1-207ENST00000483407 IGHV3-43A0A0B4J1X8 118 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF736B4DX44 427 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 MCRIP1C9JLW8 97 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 C15orf65H3BRN8 121 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 I3L521 148 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 GEMIN2O14893 280 aaKnown RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 SAP30O75446 220 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 CDRT1O95170 752 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 MT-ND4P03905 459 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 IGHV3-43DP0DP04 118 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 SLC2A2P11168 524 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 GTF2F2P13984 249 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 SERPINA2P20848 420 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 MYF6P23409 242 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF93P35789 620 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ARL3P36405 182 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF137PP52743 207 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 F2RL1P55085 397 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 RUNX1Q01196 453 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 GABPB1Q06547 395 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 GPR176Q14439 515 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 MMDQ15546 238 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 C6orf183Q5T699 404 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 TRAT1Q6PIZ9 186 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 SLC25A48Q6ZT89 311 aaKnown RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 SBSPONQ8IVN8 264 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF491Q8N8L2 437 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 OR51A2Q8NGJ7 313 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 OR6Q1Q8NGQ2 317 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 UBALD1Q8TB05 177 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 MYOZ3Q8TDC0 251 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 GPR148Q8TDV2 347 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 CCDC107Q8WV48 283 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 DCUN1D4Q92564 292 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 TMEM106AQ96A25 262 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 LGALS12Q96DT0 336 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 Q96MT0 163 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 OR5B12Q96R08 314 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF251Q9BRH9 671 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 OR51J1Q9H342 316 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ISG20L2Q9H9L3 353 aaKnown RBP4.55□□□□□ -1.68
CSDE1-207ENST00000483407 GNB4Q9HAV0 340 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 TMEM138Q9NPI0 162 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 TAS2R4Q9NYW5 299 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 ERGIC3Q9Y282 383 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 WSB1Q9Y6I7 421 aa4.55□□□□□ -1.68
CSDE1-207ENST00000483407 KIAA2026Q5HYC2 2103 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 TRAV41A0A0B4J266 112 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 LCE6AA0A183 80 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 C12orf77C9JDV5 145 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 E9PI62 339 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 ATP6V0E1O15342 81 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 SLC31A2O15432 143 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 LANCL1O43813 399 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 CA11O75493 328 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 CIB2O75838 187 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 HLA-DRB1P01911 266 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 ALPLP05186 524 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms