RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CD24P25063 80 aa14.39□□□□□ -0.11
CPNE1-224ENST00000483359 FCGR2CP31995 323 aa14.39□□□□□ -0.11
CPNE1-224ENST00000483359 RAB7AP51149 207 aa14.39□□□□□ -0.11
CPNE1-224ENST00000483359 TUSC1Q2TAM9 212 aa14.39□□□□□ -0.11
CPNE1-224ENST00000483359 RPL39P5Q59GN2 51 aa14.39□□□□□ -0.11
CPNE1-224ENST00000483359 DNAJC9-AS1A6NH13 148 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF736B4DX44 427 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-224ENST00000483359 H3BUX3 64 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 TCF21O43680 179 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 CD3DP04234 171 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 ETV6P41212 452 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 HILS1P60008 231 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 LY6G6FQ5SQ64 297 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 LDLRAD3Q86YD5 345 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 Q8N402 240 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 RBMXL1Q96E39 390 aaKnown RBP14.38□□□□□ -0.11
CPNE1-224ENST00000483359 MEGF9Q9H1U4 602 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 IER3P46695 156 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 FXYD4P59646 89 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 LRRC75BQ2VPJ9 315 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 OVCH2Q7RTZ1 564 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 TGIF2LXQ8IUE1 241 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 OR56B4Q8NH76 319 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-224ENST00000483359 ST6GALNAC6Q969X2 333 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 TOLLIPQ9H0E2 274 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 OR2W1Q9Y3N9 320 aa14.38□□□□□ -0.11
CPNE1-224ENST00000483359 IGHV3-72A0A0B4J1Y9 119 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 A0A1W2PPI3 338 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 VENTXO95231 258 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 IFNA2P01563 188 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 AADACP22760 399 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 GPR12P47775 334 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 LY6EQ16553 131 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 FAAP20Q6NZ36 180 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 PRIMA1Q86XR5 153 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 SSMEM1Q8WWF3 244 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 THAP7Q9BT49 309 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-224ENST00000483359 TINAGL1Q9GZM7 467 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-224ENST00000483359 SRRQ9GZT4 340 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 PRDM13Q9H4Q3 707 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 ABCB10Q9NRK6 738 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 PIPOXQ9P0Z9 390 aa14.37□□□□□ -0.11
CPNE1-224ENST00000483359 IGKV1D-13A0A0B4J2D9 117 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 ITGB1BP1O14713 200 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 TIMM23O14925 209 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 RAB29O14966 203 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 GSTZ1O43708 216 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 IGKV1-13P0DP09 117 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF137PP52743 207 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 DYRK1AQ13627 763 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 SLC9A3R2Q15599 337 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 CCDC144NLQ6NUI1 221 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 MOB3BQ86TA1 216 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 DRAM1Q8N682 238 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 ZDHHC22Q8N966 263 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 OR4D10Q8NGI6 311 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF2Q9BSG1 426 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF221Q9UK13 617 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 RBMX2Q9Y388 322 aaKnown RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 IGHV1-3A0A0C4DH29 117 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 PPYP01298 95 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 GAPDHP04406 335 aaKnown RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 LUMP51884 338 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 ARHGDIBP52566 201 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 TAS2R19P59542 299 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 TSPAN5P62079 268 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 RNASE10Q5GAN6 216 aaKnown RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 TMEM17Q86X19 198 aa14.36□□□□□ -0.11
CPNE1-224ENST00000483359 MRPL20Q9BYC9 149 aaKnown RBP14.36□□□□□ -0.11
CPNE1-224ENST00000483359 BTBD17A6NE02 478 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 TUSC2O75896 110 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 CSF1P09603 554 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF816Q0VGE8 651 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-224ENST00000483359 FBLN7Q53RD9 439 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF833PQ6ZTB9 187 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 DRAXINQ8NBI3 349 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-224ENST00000483359 SECTM1Q8WVN6 248 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 S1PR3Q99500 378 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 ZNF251Q9BRH9 671 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 CHIAQ9BZP6 476 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 DPAGT1Q9H3H5 408 aa14.35□□□□□ -0.11
CPNE1-224ENST00000483359 SSBP1Q04837 148 aaKnown RBP14.34□□□□□ -0.11
CPNE1-224ENST00000483359 ACTBL2Q562R1 376 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 STEAP1BQ6NZ63 245 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 GLDNQ6ZMI3 551 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-224ENST00000483359 MFSD4AQ8N468 514 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 TMEM229BQ8NBD8 167 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 PIFOQ8TCI5 191 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 TRIM63Q969Q1 353 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 C5orf30Q96GV9 206 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 AKIP1Q9NQ31 210 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 SDHAF2Q9NX18 166 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 OOSP1A8MZH6 123 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 RAB3DO95716 219 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 BRS3P32247 399 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 LINC00205P59089 165 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 HERV-K104P61576 105 aa14.34□□□□□ -0.11
CPNE1-224ENST00000483359 TMEM219Q86XT9 240 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms