RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 IL36GQ9NZH8 169 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 OAZ3Q9UMX2 235 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 EXOGQ9Y2C4 368 aaKnown RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 MRPS28Q9Y2Q9 187 aaKnown RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 FBXO7Q9Y3I1 522 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 A3GALT2U3KPV4 340 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 DNAH7Q8WXX0 4024 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 SAC3D1A6NKF1 404 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 SNTNA6NMZ2 147 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 A8MZ25 164 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 MCRIP1C9JLW8 97 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 NBR2O15453 112 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 HSPA12AO43301 675 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 PFDN1O60925 122 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 CRTAPO75718 401 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 JTBO76095 146 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 GTF2F2P13984 249 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 ARSBP15848 533 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 RCC1P18754 421 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 ALDH3A2P51648 485 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 GBX2P52951 348 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 SNRPGP62308 76 aaKnown RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 CX3CL1P78423 397 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 NDPQ00604 133 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 HAGHQ16775 308 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 MORN2Q502X0 79 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 C6orf183Q5T699 404 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 DDI2Q5TDH0 399 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF660Q6AZW8 331 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 WDR73Q6P4I2 378 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 C5orf24Q7Z6I8 188 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 LINC00596Q86U02 117 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 SGPP2Q8IWX5 399 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 ODF3L1Q8IXM7 274 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 NPBQ8NG41 125 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 OR52L2PQ8NGH6 319 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 RGP1Q92546 391 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 FLYWCH2Q96CP2 140 aaKnown RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 CENPNQ96H22 339 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 MS4A10Q96PG2 267 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 NABP2Q9BQ15 211 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 ELOVL1Q9BW60 279 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 MRPL20Q9BYC9 149 aaKnown RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 AMBNQ9NP70 447 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 RAB9BQ9NP90 201 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 TMEM138Q9NPI0 162 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 PAK1IP1Q9NWT1 392 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 ERVK13-1Q9NX77 482 aa5.67□□□□□ -1.5
CSDE1-206ENST00000483030 FOXA2Q9Y261 457 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-206ENST00000483030 FCN1O00602 326 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF780AO75290 641 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-206ENST00000483030 FADS2O95864 444 aaKnown RBP5.66□□□□□ -1.5
CSDE1-206ENST00000483030 IGLV1-51P01701 117 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 IFNA6P05013 189 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 CD2P06729 351 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 EGR2P11161 476 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-206ENST00000483030 FCGR1AP12314 374 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 PPP1CCP36873 323 aaKnown RBP5.66□□□□□ -1.5
CSDE1-206ENST00000483030 OR3A3P47888 321 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 PPP3R1P63098 170 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 GNMTQ14749 295 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 LRRC36Q1X8D7 754 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 TMEM30BQ3MIR4 351 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 ZIK1Q3SY52 487 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-206ENST00000483030 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 LYPD6Q86Y78 171 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 GPR148Q8TDV2 347 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 ABHD5Q8WTS1 349 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 TMEM106AQ96A25 262 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 ORAI1Q96D31 301 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 BCL7BQ9BQE9 202 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 ABHD14AQ9BUJ0 271 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 CST11Q9H112 138 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 FBXL15Q9H469 300 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 TAF9BQ9HBM6 251 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 SPACA1Q9HBV2 294 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 C12orf4Q9NQ89 552 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 KIAA1456Q9P272 454 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 STUB1Q9UNE7 303 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 NUBP2Q9Y5Y2 271 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 PEX16Q9Y5Y5 336 aa5.66□□□□□ -1.5
CSDE1-206ENST00000483030 UBE2QL1A1L167 161 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CIDEAO60543 219 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 NOL3O60936 208 aaKnown RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 NDUFA3O95167 84 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 BDKRB2P30411 391 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CRIP2P52943 208 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 TPPP2P59282 170 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 TMEM267Q0VDI3 215 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 RAB40BQ12829 278 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 GPR176Q14439 515 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 PLGLAQ15195 96 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 ACTBL2Q562R1 376 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 C1orf146Q5VVC0 180 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 XAF1Q6GPH4 301 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 FAM122CQ6P4D5 195 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 TRAT1Q6PIZ9 186 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CD200R1LQ6Q8B3 271 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms