RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ASCL3Q9NQ33 180 aa6.5□□□□□ -1.37
SNX13-208ENST00000482558 ZC4H2Q9NQZ6 224 aa6.5□□□□□ -1.37
SNX13-208ENST00000482558 SLC2A9Q9NRM0 540 aa6.5□□□□□ -1.37
SNX13-208ENST00000482558 TMEM100Q9NV29 134 aa6.5□□□□□ -1.37
SNX13-208ENST00000482558 CLCF1Q9UBD9 225 aa6.5□□□□□ -1.37
SNX13-208ENST00000482558 CNTRLQ7Z7A1 2325 aa6.5□□□□□ -1.37
SNX13-208ENST00000482558 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 MYO7BQ6PIF6 2116 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 BORCS7-ASMTA0A0B4J1R7 106 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 BTBD17A6NE02 478 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 DIRC3C9JPN6 131 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 GPR31O00270 319 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 DEGS1O15121 323 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 MPPED1O15442 326 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 ADAP1O75689 374 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 CEACAM4O75871 244 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 PPYP01298 95 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 CRYGCP07315 174 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 CBR1P16152 277 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 PRKACAP17612 351 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 BCL3P20749 454 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 GATA3P23771 443 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 OPRM1P35372 400 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 P2RY1P47900 373 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 KCNJ3P48549 501 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 RAB5CP51148 216 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 GNMTQ14749 295 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 ATXN7L3Q14CW9 347 aaPredicted RBP6.49□□□□□ -1.37
SNX13-208ENST00000482558 P2RY6Q15077 328 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 GUSBP1Q15486 140 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 TGIF1Q15583 401 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 PDLIM3Q53GG5 364 aaPredicted RBP6.49□□□□□ -1.37
SNX13-208ENST00000482558 SPIN3Q5JUX0 258 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 PRAMEF5Q5TYX0 476 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 PRAMEF6Q5VXH4 476 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 GGNBP1Q5YKI7 109 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 FAM159AQ6UWV7 190 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 BTNL8Q6UX41 500 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 IGFL3Q6UXB1 125 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 MDP1Q86V88 176 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 ZADH2Q8N4Q0 377 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 HPSE2Q8WWQ2 592 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 MAFIPQ8WZ33 124 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 TOMM40LQ969M1 308 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 ARL11Q969Q4 196 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 C18orf12Q96KH6 178 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 OR10C1Q96KK4 312 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 TMEM56Q96MV1 263 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 CITED1Q99966 193 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 BCL2L14Q9BZR8 327 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 WDR13Q9H1Z4 485 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 OR51I2Q9H344 312 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 GSKIPQ9P0R6 139 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 SPRR3Q9UBC9 169 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 PEF1Q9UBV8 284 aaKnown RBP6.49□□□□□ -1.37
SNX13-208ENST00000482558 NDRG3Q9UGV2 375 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 TMEM56-RWDD3S4R434 201 aa6.49□□□□□ -1.37
SNX13-208ENST00000482558 IGKV1D-8A0A087WSZ0 117 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 C3orf85A0A1B0GTC6 90 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 IQCF6A8MYZ5 107 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 KCNAB3O43448 404 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 GPR137BO60478 399 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 HOXD4P09016 255 aaPredicted RBP6.48□□□□□ -1.37
SNX13-208ENST00000482558 SLC25A6P12236 298 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 CEACAM1P13688 526 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 ZNF44P15621 663 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 ZNF14P17017 642 aaPredicted RBP6.48□□□□□ -1.37
SNX13-208ENST00000482558 COX5AP20674 150 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 RPL12P30050 165 aaKnown RBP6.48□□□□□ -1.37
SNX13-208ENST00000482558 CCL11P51671 97 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 S100A10P60903 97 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 PPP1CBP62140 327 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 CFHR3Q02985 330 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 C9orf135Q5VTT2 229 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 ZNF880Q6PDB4 577 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 HAGHLQ6PII5 290 aaPredicted RBP6.48□□□□□ -1.37
SNX13-208ENST00000482558 CD164L2Q6UWJ8 174 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 SSX8Q7RTT4 187 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 LDLRAD3Q86YD5 345 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 LRRC75A-AS1Q8N1F1 130 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 UBAC2Q8NBM4 344 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 DEFB124Q8NES8 71 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 OR5T2Q8NGG2 359 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 NEK7Q8TDX7 302 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 AKR1E2Q96JD6 320 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 HDHD3Q9BSH5 251 aaPredicted RBP6.48□□□□□ -1.37
SNX13-208ENST00000482558 SLC25A31Q9H0C2 315 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 DNAJC4Q9NNZ3 241 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 MTCH1Q9NZJ7 389 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 AMDHD2Q9Y303 409 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 BDP1A6H8Y1 2624 aa6.48□□□□□ -1.37
SNX13-208ENST00000482558 TMEM89A2RUT3 159 aa6.47□□□□□ -1.37
SNX13-208ENST00000482558 CLEC18AA5D8T8 446 aa6.47□□□□□ -1.37
SNX13-208ENST00000482558 RNF212BA8MTL3 300 aa6.47□□□□□ -1.37
SNX13-208ENST00000482558 H0Y980 276 aa6.47□□□□□ -1.37
SNX13-208ENST00000482558 H0YIZ8 118 aa6.47□□□□□ -1.37
SNX13-208ENST00000482558 SH2D1BO14796 132 aa6.47□□□□□ -1.37
SNX13-208ENST00000482558 PHF1O43189 567 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms