RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 CCDC144NLQ6NUI1 221 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 VMO1Q7Z5L0 202 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CCDC71LQ8N9Z2 235 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 OR4D10Q8NGI6 311 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 OR13C8Q8NGS7 320 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CT45A3Q8NHU0 189 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CD300LFQ8TDQ1 290 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CHPT1Q8WUD6 406 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 ST6GALNAC6Q969X2 333 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 MALSU1Q96EH3 234 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CYYR1Q96J86 154 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 HSD17B10Q99714 261 aaKnown RBP6.74□□□□□ -1.33
SYNE1-225ENST00000481502 PCGF1Q9BSM1 259 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 MMP28Q9H239 520 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 OR1A1Q9P1Q5 309 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 DPM3Q9P2X0 92 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 KCNS2Q9ULS6 477 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 C14orf166Q9Y224 244 aaKnown RBP6.74□□□□□ -1.33
SYNE1-225ENST00000481502 KCNIP3Q9Y2W7 256 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 RBM7Q9Y580 266 aaKnown RBP6.74□□□□□ -1.33
SYNE1-225ENST00000481502 YLPM1P49750 1951 aaKnown RBP6.73□□□□□ -1.33
SYNE1-225ENST00000481502 ABCA1O95477 2261 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 BUB1B-PAK6H3BSN5 160 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 ST8SIA5O15466 376 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 MMP23AO75900 390 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 DHFRP00374 187 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 IL5P05113 134 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 OR8U9P0C7N5 309 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 RPA2P15927 270 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 HTR1DP28221 377 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 MC5RP33032 325 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 KIR2DS2P43631 304 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 ARHGDIBP52566 201 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF134P52741 427 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 LGALS4P56470 323 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 DHODHQ02127 395 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF816Q0VGE8 651 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-225ENST00000481502 CATR1Q13166 79 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 AANATQ16613 207 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 PRAMEF5Q5TYX0 476 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 GPR157Q5UAW9 335 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 NRARPQ7Z6K4 114 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 SLC25A42Q86VD7 318 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 LDLRAD3Q86YD5 345 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 CADM3Q8N126 398 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 OR8H3Q8N146 312 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 CENPSQ8N2Z9 138 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 OR8U1Q8NH10 309 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 NANPQ8TBE9 248 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 GALNT14Q96FL9 552 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 TBX15Q96SF7 602 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 AIFM2Q9BRQ8 373 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 TMUB1Q9BVT8 246 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 SUCNR1Q9BXA5 334 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 TMPRSS13Q9BYE2 586 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 SLC5A7Q9GZV3 580 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 IFI27L2Q9H2X8 130 aa6.73□□□□□ -1.33
SYNE1-225ENST00000481502 ITPR3Q14573 2671 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 CENPVL3A0A0U1RRI6 287 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 RNASEK-C17orf49H0YIS7 233 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 LY6LH3BQJ8 138 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 RBFOX2O43251 390 aaKnown RBP eCLIP6.72□□□□□ -1.33
SYNE1-225ENST00000481502 PEX14O75381 377 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 GAPDHP04406 335 aaKnown RBP6.72□□□□□ -1.33
SYNE1-225ENST00000481502 RRASP10301 218 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 ANXA3P12429 323 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 GPR12P47775 334 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 DYNLT3P51808 116 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 SRPXP78539 464 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 HABP2Q14520 560 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-225ENST00000481502 TRIM16LQ309B1 348 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 ABCA11PQ4W5N1 156 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 DHRS7BQ6IAN0 325 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-225ENST00000481502 HCP5Q6MZN7 132 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 CCBE1Q6UXH8 406 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 PNKDQ8N490 385 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 OR4P4Q8NGL7 312 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 OR10X1Q8NGY0 326 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 MARCH1Q8TCQ1 289 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 MRGPRFQ96AM1 343 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 RNF5Q99942 180 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 RTBDNQ9BSG5 229 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-225ENST00000481502 C20orf85Q9H1P6 137 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 C5orf66Q9H5L9 145 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 SLC2A9Q9NRM0 540 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 PRELID3BQ9Y3B1 194 aa6.72□□□□□ -1.33
SYNE1-225ENST00000481502 IGHV3-43A0A0B4J1X8 118 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 A0A0B4J2A0 478 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 IGKV1D-13A0A0B4J2D9 117 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 IGHV1-69DA0A0B4J2H0 117 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 LINC00854A0A1B0GVQ3 168 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SNRPGP15A8MWD9 76 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 INMT-MINDY4F8WBC2 141 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 MPPED1O15442 326 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 PGLYRP1O75594 196 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ATG12O94817 140 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 FSHBP01225 129 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms