RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 WASHC3Q9Y3C0 194 aa8.19□□□□□ -1.1
GARNL3-216ENST00000481242 MPDU1O75352 247 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 GCM2O75603 506 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 GFRA1P56159 465 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ATP5IP56385 69 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 RPL30P62888 115 aaKnown RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 TEPPQ6URK8 271 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 SLC35B3Q9H1N7 401 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF552Q9H707 407 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 SLC25A22Q9H936 323 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 LOC285556D6RIA3 1793 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 LOC102723996A0A087X1L8 192 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ODAMA1E959 279 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF205O95201 554 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 FCGR3AP08637 254 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 FOXL2P58012 376 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 PCSK4Q6UW60 755 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 KLF14Q8TD94 323 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 SCNM1Q9BWG6 230 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 SPTBP11277 2137 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF737O75373 536 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 IGHV3-13P01766 116 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 IGHV3-7P01780 117 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ARG1P05089 322 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 LIPFP07098 398 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 NTF3P20783 257 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 WDR73Q6P4I2 378 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 OR1B1Q8NGR6 318 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 TIAF1O95411 115 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF345Q14585 488 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 MYPOPQ86VE0 399 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 CBLN2Q8IUK8 224 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 OR9G1Q8NH87 305 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 GGACTQ9BVM4 153 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 ASCL3Q9NQ33 180 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 JPT1Q9UK76 154 aa8.18□□□□□ -1.1
GARNL3-216ENST00000481242 CHCHD2Q9Y6H1 151 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-216ENST00000481242 IGHV3OR15-7A0A075B7D8 119 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 HBZP02008 142 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 GYPAP02724 150 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 OPN1MWP04001 364 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 RNF224P0DH78 156 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 OPN1MW2P0DN77 364 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 OPN1MW3P0DN78 364 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 INPP5JQ15735 1006 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 IZUMO4Q1ZYL8 232 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 MAJINQ3KP22 176 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 OPN4Q9UHM6 478 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 LHFPL6Q9Y693 200 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM229AB2RXF0 380 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 F5H697 171 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 SIGLEC5O15389 551 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 FAM87AP0C7U9 286 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 PPP1CCP36873 323 aaKnown RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 NHLRC3Q5JS37 347 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 GTF3AQ92664 365 aaKnown RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM54Q969K7 222 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 MRGPRFQ96AM1 343 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM186Q96B77 213 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 C2orf88Q9BSF0 95 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 TRPM7Q96QT4 1865 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 ARID2Q68CP9 1835 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 IGHV1-69-2A0A0G2JMI3 117 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 OR2H2O95918 312 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 ACAA1P09110 424 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 NANOS3P60323 173 aaKnown RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 WDR31Q8NA23 367 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 IDI2-AS1Q9NZ38 188 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 CLCF1Q9UBD9 225 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 NAAAQ02083 359 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 CFHR1Q03591 330 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 ZFP36L1Q07352 338 aaKnown RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 FAM78BQ5VT40 261 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 C10orf113Q5VZT2 155 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 ABHD17AQ96GS6 310 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 RHOVQ96L33 236 aa8.17□□□□□ -1.1
GARNL3-216ENST00000481242 BRCA1P38398 1863 aaKnown RBP8.17□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF236Q9UL36 1845 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 PPIAL4CA0A0B4J2A2 164 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 A0A1B0GWJ7 208 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 IGSF23A1L1A6 192 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 FAM90A26D6RGX4 464 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 H0Y980 276 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF207O43670 478 aaKnown RBP8.16□□□□□ -1.1
GARNL3-216ENST00000481242 ADAP1O75689 374 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 PPIAL4GP0DN37 164 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 RAB9AP51151 201 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 LSM11P83369 360 aaKnown RBP eCLIP8.16□□□□□ -1.1
GARNL3-216ENST00000481242 ECSCRQ19T08 205 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 NCMAPQ5T1S8 102 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 BLNKQ8WV28 456 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 TXNDC17Q9BRA2 123 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 KCNE5Q9UJ90 142 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 OR51B2Q9Y5P1 312 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms