RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 RAG2P55895 527 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 TSPAN5P62079 268 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 SSX2Q16385 188 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 LY6EQ16553 131 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 VAX1Q5SQQ9 334 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 GAPTQ8N292 157 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 CENPSQ8N2Z9 138 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 ZNF565Q8N9K5 539 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 SSX3Q99909 188 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 CLEC7AQ9BXN2 247 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 NECAP2Q9NVZ3 263 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 IDI2-AS1Q9NZ38 188 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 NUBP2Q9Y5Y2 271 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 A0A087X0M5 115 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 A0A1B0GX30 115 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 A0A1W2PPE3 182 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 MEIS3P1A6NDR6 274 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 TRDCB7Z8K6 153 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 LY6LH3BQJ8 138 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 CHST1O43916 411 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 NAPSAO96009 420 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 DHFRP00374 187 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 FCGR3AP08637 254 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 RCC1P18754 421 aaPredicted RBP9.86□□□□□ -0.83
PTPRF-213ENST00000481019 GZMHP20718 246 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 HLA-DMAP28067 261 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 CD34P28906 385 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 LGALS4P56470 323 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 CDK10Q15131 360 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 RBMS2Q15434 407 aaKnown RBP9.86□□□□□ -0.83
PTPRF-213ENST00000481019 C6orf183Q5T699 404 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 CCBE1Q6UXH8 406 aaPredicted RBP9.86□□□□□ -0.83
PTPRF-213ENST00000481019 NRARPQ7Z6K4 114 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 MRPL30Q8TCC3 161 aaKnown RBP9.86□□□□□ -0.83
PTPRF-213ENST00000481019 CREB3L1Q96BA8 519 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 SLC2A8Q9NY64 477 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 ANXA10Q9UJ72 324 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 VPREB3Q9UKI3 123 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 TRAPPC2LQ9UL33 140 aa9.86□□□□□ -0.83
PTPRF-213ENST00000481019 PKD1L1Q8TDX9 2849 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 IGHV3-43A0A0B4J1X8 118 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 C12orf77C9JDV5 145 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 AMY2AP04746 511 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 IGHV3-43DP0DP04 118 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 RFX2P48378 723 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 DIAPH2-AS1Q14236 149 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 LRRC75BQ2VPJ9 315 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 C11orf88Q6PI97 169 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 C12orf54Q6X4T0 127 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 GVQW1Q8N7I0 195 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 OR4C16Q8NGL9 310 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 OR4A4PQ8NGN8 299 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 OR6F1Q8NGZ6 308 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 OR56B4Q8NH76 319 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 OR1L1Q8NH94 360 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 ARL11Q969Q4 196 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 RBMXL1Q96E39 390 aaKnown RBP9.85□□□□□ -0.83
PTPRF-213ENST00000481019 MALSU1Q96EH3 234 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 HDHD3Q9BSH5 251 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-213ENST00000481019 Q9N2K0 584 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 SLC23A1Q9UHI7 598 aa9.85□□□□□ -0.83
PTPRF-213ENST00000481019 ELF5Q9UKW6 265 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-213ENST00000481019 TBL2Q9Y4P3 447 aaKnown RBP9.85□□□□□ -0.83
PTPRF-213ENST00000481019 VGLL3A8MV65 326 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 SLC31A2O15432 143 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 TCRBP04435 133 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 CD24P25063 80 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 HRH1P35367 487 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 GNG10P50151 68 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 LOXL3P58215 753 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 KRTAP10-3P60369 221 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 SRSF4Q08170 494 aaKnown RBP9.84□□□□□ -0.83
PTPRF-213ENST00000481019 HLA-DRB5Q30154 266 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 TMEM30BQ3MIR4 351 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 MINOS1Q5TGZ0 78 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 OR52W1Q6IF63 320 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 LPCAT3Q6P1A2 487 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 ZNF880Q6PDB4 577 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 Q6ZNX1 250 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 Q6ZSV7 163 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 OVCH2Q7RTZ1 564 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 TMEM219Q86XT9 240 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 TERB2Q8NHR7 220 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 SNAPC3Q92966 411 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 MARVELD1Q9BSK0 173 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 EHFQ9NZC4 300 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 PSG11Q9UQ72 335 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 MINOS1-NBL1R4GNA1 71 aa9.84□□□□□ -0.83
PTPRF-213ENST00000481019 FBN3Q75N90 2809 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 A6NDX4 124 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 BUB1B-PAK6H3BSN5 160 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 J3QR06 171 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 F2RL2O00254 374 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 FABP7O15540 132 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 SPINT2O43291 252 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 PRAF2O60831 178 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 NDUFA7O95182 113 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 HBZP02008 142 aa9.83□□□□□ -0.84
PTPRF-213ENST00000481019 PMP2P02689 132 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms