RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 MRPL48Q96GC5 212 aaKnown RBP6.09□□□□□ -1.43
LSM5-210ENST00000480956 SLC45A3Q96JT2 553 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 DNAJC30Q96LL9 226 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 LYRM2Q9NU23 88 aaPredicted RBP6.09□□□□□ -1.43
LSM5-210ENST00000480956 PRNDQ9UKY0 176 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 PKD1L3Q7Z443 1732 aa6.09□□□□□ -1.44
LSM5-210ENST00000480956 NWD2Q9ULI1 1742 aa6.09□□□□□ -1.44
LSM5-210ENST00000480956 F8W036 122 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 G3V2T6 193 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 PEX7O00628 323 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 PDYNP01213 254 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 FGF6P10767 208 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 GLRXP35754 106 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 FABP5Q01469 135 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 WHAMMP3Q1A5X7 153 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 OSR2Q8N2R0 312 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 FAM24BQ8N5W8 94 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 Q8NBF4 154 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 ANKRD36BP1Q96IX9 119 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 SMIM14Q96QK8 99 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 TMEM204Q9BSN7 226 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 CCDC90BQ9GZT6 254 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 FAM96AQ9H5X1 160 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 JPT1Q9UK76 154 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 LRRC37A3O60309 1634 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 CRB1P82279 1406 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 IGKV1-27A0A075B6S5 117 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 A0A0G2JN53 185 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 A0A1B0GV90 55 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 ZNF850A8MQ14 1090 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 PATE4P0C8F1 98 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 CTLA4P16410 223 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 OGNP20774 298 aaKnown RBP6.08□□□□□ -1.44
LSM5-210ENST00000480956 S100A7P31151 101 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 GNG5P63218 68 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 MEF2CQ06413 473 aaPredicted RBP6.08□□□□□ -1.44
LSM5-210ENST00000480956 RUNX3Q13761 415 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 UBE2NLQ5JXB2 153 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 FAM182AQ5T1J6 154 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 C1orf194Q5T5A4 169 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 Q6ZSR6 202 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 MOB1BQ7L9L4 216 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 VN1R4Q7Z5H5 301 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 HSD17B13Q7Z5P4 300 aaPredicted RBP6.08□□□□□ -1.44
LSM5-210ENST00000480956 ANGPTL5Q86XS5 388 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 OR11H6Q8NGC7 330 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 GNPDA2Q8TDQ7 276 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 KCNS1Q96KK3 526 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 OR7D2Q96RA2 312 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 KLF6Q99612 283 aaPredicted RBP6.08□□□□□ -1.44
LSM5-210ENST00000480956 ZNF702PQ9H963 129 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 UQCC1Q9NVA1 299 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 POMPQ9Y244 141 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 WASHC3Q9Y3C0 194 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 TOGARAM1Q9Y4F4 1720 aa6.08□□□□□ -1.44
LSM5-210ENST00000480956 ABCC6O95255 1503 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 DOT1LQ8TEK3 1739 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 TRIP12Q14669 1992 aaPredicted RBP6.07□□□□□ -1.44
LSM5-210ENST00000480956 SCN11AQ9UI33 1791 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 IGHV2-26A0A0B4J1V2 119 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 E7EQ34 232 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 M0R1X1 148 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 ZNF253O75346 499 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 SULT1C4O75897 302 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 OR2J2O76002 312 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 C1QBP02746 253 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 BPGMP07738 259 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 OR56A5P0C7T3 313 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 GABRR1P24046 479 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 POLR2IP36954 125 aaKnown RBP6.07□□□□□ -1.44
LSM5-210ENST00000480956 HERVK_113P61574 105 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 RPL23P62829 140 aaKnown RBP6.07□□□□□ -1.44
LSM5-210ENST00000480956 HENMT1Q5T8I9 393 aaKnown RBP6.07□□□□□ -1.44
LSM5-210ENST00000480956 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 NXNL2Q5VZ03 156 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 C11orf53Q8IXP5 236 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 ZIC4Q8N9L1 334 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 OR8S1Q8NH09 359 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 ANAPC13Q9BS18 74 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 EFCAB11Q9BUY7 163 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 PARP12Q9H0J9 701 aaKnown RBP6.07□□□□□ -1.44
LSM5-210ENST00000480956 KLK13Q9UKR3 277 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 COX11Q9Y6N1 276 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 NFASCO94856 1347 aa6.07□□□□□ -1.44
LSM5-210ENST00000480956 SLIT2O94813 1529 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 IGLV8-61A0A075B6I0 122 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 ARL5CA6NH57 179 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 BGLAPP02818 100 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 ZNF30P17039 623 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 RPL34P49207 117 aaKnown RBP6.06□□□□□ -1.44
LSM5-210ENST00000480956 GRB2P62993 217 aaKnown RBP6.06□□□□□ -1.44
LSM5-210ENST00000480956 Q6ZRU5 148 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 TWIST2Q8WVJ9 160 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 FAM151AQ8WW52 585 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 EIF5A2Q9GZV4 153 aaKnown RBP6.06□□□□□ -1.44
LSM5-210ENST00000480956 SH3BGRL3Q9H299 93 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 TPT1P8Q9HAU6 139 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 PARP11Q9NR21 331 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 PSG8Q9UQ74 426 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms