RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 HMGB3O15347 200 aaKnown RBP11.48□□□□□ -0.57
C9orf78-205ENST00000480023 DNPH1O43598 174 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
C9orf78-205ENST00000480023 SERPINA7P05543 415 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 CD82P27701 267 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 ADMP35318 185 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 TDRG1Q3Y452 100 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 DMRTA1Q5VZB9 504 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 C20orf204Q6ZNR8 217 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 NUFIP2Q7Z417 695 aaKnown RBP11.48□□□□□ -0.57
C9orf78-205ENST00000480023 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 NEK7Q8TDX7 302 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 FGF23Q9GZV9 251 aaPredicted RBP11.48□□□□□ -0.57
C9orf78-205ENST00000480023 ASCL3Q9NQ33 180 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 LIN7CQ9NUP9 197 aaKnown RBP11.48□□□□□ -0.57
C9orf78-205ENST00000480023 CD207Q9UJ71 328 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 SZT2Q5T011 3432 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 UNC13CQ8NB66 2214 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 B4GALT1P15291 398 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 PCBD1P61457 104 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 COLCA1Q6ZS62 124 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 PLA2G3Q9NZ20 509 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 IL36RNQ9UBH0 155 aa11.48□□□□□ -0.57
C9orf78-205ENST00000480023 TNRC6BQ9UPQ9 1833 aaKnown RBP11.48□□□□□ -0.57
C9orf78-205ENST00000480023 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 PATE4P0C8F1 98 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 DSCR4P56555 118 aaPredicted RBP11.47□□□□□ -0.57
C9orf78-205ENST00000480023 GNB1P62873 340 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 CCL7P80098 99 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 OR5I1Q13606 314 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 VWC2Q2TAL6 325 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 FFAR4Q5NUL3 377 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 ZNF468Q5VIY5 522 aaPredicted RBP11.47□□□□□ -0.57
C9orf78-205ENST00000480023 OR8G2PQ6IF36 304 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 WDR74Q6RFH5 385 aaPredicted RBP11.47□□□□□ -0.57
C9orf78-205ENST00000480023 SGMS2Q8NHU3 365 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 EML6Q6ZMW3 1958 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 A0A0J9YW62 118 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 PMS2P5A8MQ11 134 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 HSPB6O14558 160 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 ZIC3O60481 467 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 CD27P26842 260 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 NTF4P34130 210 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 MPLP40238 635 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 COMPP49747 757 aaPredicted RBP11.47□□□□□ -0.57
C9orf78-205ENST00000480023 LHX2P50458 406 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 RAET1LQ5VY80 246 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 SFRP2Q96HF1 295 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 FOXB1Q99853 325 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 SRXN1Q9BYN0 137 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 DEFB126Q9BYW3 111 aa11.47□□□□□ -0.57
C9orf78-205ENST00000480023 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
C9orf78-205ENST00000480023 LIFP15018 202 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 PLA2G5P39877 138 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 RAC1P63000 192 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 MKXQ8IYA7 352 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 ZDHHC23Q8IYP9 409 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 DTD1Q8TEA8 209 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.57
C9orf78-205ENST00000480023 NPCDR1Q9BY65 106 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 MTIF3Q9H2K0 278 aaKnown RBP11.46□□□□□ -0.57
C9orf78-205ENST00000480023 MSL2Q9HCI7 577 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 KCNIP2Q9NS61 270 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.57
C9orf78-205ENST00000480023 KIAA0100Q14667 2235 aaKnown RBP11.46□□□□□ -0.58
C9orf78-205ENST00000480023 F6UZH7 168 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 TRAPPC2LH3BP13 241 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 SIAH2O43255 324 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 SYNGR4O95473 234 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 CLDN1O95832 211 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 KRASP01116 189 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 C1QTNF9P0C862 333 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 CEACAM21Q3KPI0 293 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 RIPPLY2Q5TAB7 128 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 OR56B2PQ8NGI1 322 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 RAB1CQ92928 201 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 ALKBH3Q96Q83 286 aaPredicted RBP11.45□□□□□ -0.58
C9orf78-205ENST00000480023 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 ZDHHC11Q9H8X9 412 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 TNRC6AQ8NDV7 1962 aaKnown RBP11.45□□□□□ -0.58
C9orf78-205ENST00000480023 ABCA7Q8IZY2 2146 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 IGHV1OR15-9A0A0B4J2B8 117 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 CBR3O75828 277 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 GLB1P16278 677 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 CD33P20138 364 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 CDKN1AP38936 164 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 RAB7AP51149 207 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 RAC3P60763 192 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 MSMO1Q15800 293 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 TCF23Q7RTU1 214 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 OR5T1Q8NG75 326 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 OR5AU1Q8NGC0 362 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 RLN3Q8WXF3 142 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 PSMF1Q92530 271 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms