RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 TMEM239Q8WW34 195 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 ACOT11Q8WXI4 607 aaPredicted RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 ARPC1AQ92747 370 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 SLC25A44Q96H78 314 aaPredicted RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 TMEM101Q96IK0 257 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 WFDC6Q9BQY6 131 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 TMEM59Q9BXS4 323 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 RANBP3Q9H6Z4 567 aaPredicted RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 INPP5EQ9NRR6 644 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 PLSCR3Q9NRY6 295 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 OPN4Q9UHM6 478 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 MED31Q9Y3C7 131 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 KIF25-AS1Q9Y6Z4 181 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 A0A0G2JMP0 313 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 A0A0X1KG70 313 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 SMCO3A2RU48 225 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 PSMB11A5LHX3 300 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 FAM231BA6NCW3 169 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF726A6NNF4 738 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 SOX15O60248 233 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 FAM107AO95990 144 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 IGHMP01871 453 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 INAFM2P0DMQ5 153 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 CD1BP29016 333 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 CSNK1A1P48729 337 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 NUDT2P50583 147 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 SMIM11AP58511 58 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 TAS2R41P59536 307 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 UBE2NP61088 152 aaKnown RBP3.66□□□□□ -1.82
UPF3A-205ENST00000479712 GNGT1P63211 74 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 PRKCDQ05655 676 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 DGCR6Q14129 220 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 TRAM2Q15035 370 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 CEACAM16Q2WEN9 425 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 C10orf128Q5T292 105 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF620Q6ZNG0 422 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 SLC35D2Q76EJ3 337 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 CYP4Z1Q86W10 505 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 RBM45Q8IUH3 476 aaKnown RBP3.66□□□□□ -1.82
UPF3A-205ENST00000479712 NKAIN4Q8IVV8 208 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 PNKDQ8N490 385 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 OR4M2Q8NGB6 313 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 OR2G2Q8NGZ5 317 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 PLPPR1Q8TBJ4 325 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 TMEM54Q969K7 222 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 SGTBQ96EQ0 304 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 KCTD14Q9BQ13 255 aaPredicted RBP3.66□□□□□ -1.82
UPF3A-205ENST00000479712 TMEM246Q9BRR3 403 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 NDEL1Q9GZM8 345 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 C1orf198Q9H425 327 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF442Q9H7R0 627 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 SIAEQ9HAT2 523 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 EDA2RQ9HAV5 297 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 CRLF2Q9HC73 371 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 MYOZ1Q9NP98 299 aaPredicted RBP3.66□□□□□ -1.82
UPF3A-205ENST00000479712 TAS2R5Q9NYW4 299 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 GLTPQ9NZD2 209 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 RABL2AQ9UBK7 228 aaPredicted RBP3.66□□□□□ -1.82
UPF3A-205ENST00000479712 CD300AQ9UGN4 299 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 ENPP4Q9Y6X5 453 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 ARHGAP32A7KAX9 2087 aa3.66□□□□□ -1.82
UPF3A-205ENST00000479712 IGHV1-18A0A0C4DH31 117 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 KIR2DL5BA0A0G2JN68 375 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 KIR2DL5BA0A0G2JPC4 375 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 A0A1W2PRG6 482 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 C12orf77C9JDV5 145 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 FFAR1O14842 300 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 ANGPTL7O43827 346 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 UBL3O95164 117 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 MPZL1O95297 269 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 FARS2O95363 451 aaKnown RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 SERPINA1P01009 418 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 IGHV2-5P01817 119 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 CECR9P0C854 216 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 PGA4P0DJD7 388 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 PGA3P0DJD8 388 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 TCN1P20061 433 aaPredicted RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 FUT3P21217 361 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 OR1E2P47887 323 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 EVX1P49640 407 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF83P51522 516 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 UGT2B15P54855 530 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 RPS23P62266 143 aaKnown RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 RAP1AP62834 184 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 NDPQ00604 133 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 RPL18Q07020 188 aaKnown RBP3.65□□□□□ -1.83
UPF3A-205ENST00000479712 HIKESHIQ53FT3 197 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 GLYATQ6IB77 296 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 MBOAT2Q6ZWT7 520 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 C1orf174Q8IYL3 243 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 SPAG16Q8N0X2 631 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 KIR2DL5AQ8N109 375 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 LINC00471Q8N535 108 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 NOXO1Q8NFA2 376 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 OR4S1Q8NGB4 309 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 OR6N1Q8NGY5 312 aa3.65□□□□□ -1.83
UPF3A-205ENST00000479712 KIR2DL5BQ8NHK3 375 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms