RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 MPV17LQ2QL34 196 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 HIKESHIQ53FT3 197 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 KHDC3LQ587J8 217 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 DNLZQ5SXM8 178 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 CST9LP1Q5W188 147 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM42Q69YG0 159 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 SLC25A24Q6NUK1 477 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM182Q6ZP80 229 aaPredicted RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 C16orf47Q6ZP98 133 aaPredicted RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 MOB1BQ7L9L4 216 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 WDFY1Q8IWB7 410 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 MKXQ8IYA7 352 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 ZFP82Q8N141 532 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM156Q8N614 296 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 DEFB119Q8N690 84 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 WDSUB1Q8N9V3 476 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 HSD17B11Q8NBQ5 300 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OR10AD1Q8NGE0 317 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OR5L1Q8NGL2 311 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OR4D5Q8NGN0 318 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OR10G4Q8NGN3 311 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OR2G3Q8NGZ4 309 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 MAFIPQ8WZ33 124 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 CPNE4Q96A23 557 aaPredicted RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 NABP1Q96AH0 204 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 SGK3Q96BR1 496 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TVP23CQ96ET8 276 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM56Q96MV1 263 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 SLC25A33Q9BSK2 321 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 FAAP24Q9BTP7 215 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OR51M1Q9H341 326 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 SEBOXQ9HB31 216 aaPredicted RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 LYRM2Q9NU23 88 aaPredicted RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM38BQ9NVV0 291 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 OCIAD1Q9NX40 245 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF319Q9P2F9 582 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 MRPS18CQ9Y3D5 142 aaKnown RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 CHCHD2Q9Y6H1 151 aaPredicted RBP3.62□□□□□ -1.83
GPNMB-210ENST00000478451 SLCO1B1Q9Y6L6 691 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM56-RWDD3S4R434 201 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 ALPK2Q86TB3 2170 aa3.62□□□□□ -1.83
GPNMB-210ENST00000478451 LAMA2P24043 3122 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 IGLV5-52A0A0A0MRZ9 124 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 IGHV1-45A0A0A0MS14 117 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 IGHV5-10-1A0A0J9YXX1 117 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 A0A1B0GUV1 79 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 hCG_38984A0A1B0GV85 526 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SHISA7A6NL88 538 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 RNF212BA8MTL3 300 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF732B4DXR9 585 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 H0Y980 276 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 TRAPPC2LH3BP13 241 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 K7N7A8 449 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 M0QZ24 198 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 GEMIN2O14893 280 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 DEGS1O15121 323 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SPRY1O43609 319 aaPredicted RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SYNGR3O43761 229 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ZIC3O60481 467 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 NDUFS6O75380 124 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 WNT2P09544 360 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 COX5BP10606 129 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 VDAC1P21796 283 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 AADACP22760 399 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ITGA3P26006 1051 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 GNRHRP30968 328 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 MDH2P40926 338 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 CD200P41217 278 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 CARD18P57730 90 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 TAS2R30P59541 319 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 UBE2KP61086 200 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 HBG1P69891 147 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 HBG2P69892 147 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 EFNB3Q15768 340 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ACSF3Q4G176 576 aaPredicted RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 PHLDA2Q53GA4 152 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SPIN3Q5JUX0 258 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF506Q5JVG8 444 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 PAPPA-AS1Q5QFB9 102 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 PRAMEF20Q5VT98 475 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SPSB3Q6PJ21 355 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 MEX3BQ6ZN04 569 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 Q6ZTC4 211 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 AAED1Q7RTV5 226 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 LYZL2Q7Z4W2 148 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SLC35E3Q7Z769 313 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF429Q86V71 674 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 RPS19BP1Q86WX3 136 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 H1FOOQ8IZA3 346 aaPredicted RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 C1orf87Q8N0U7 546 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SLC25A45Q8N413 288 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SLC35G3Q8N808 338 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 BHLHE23Q8NDY6 225 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 Q8NFD4 153 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 OR5D13Q8NGL4 314 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 RNASE11Q8TAA1 199 aaKnown RBP3.61□□□□□ -1.83
GPNMB-210ENST00000478451 NANPQ8TBE9 248 aa3.61□□□□□ -1.83
GPNMB-210ENST00000478451 SCGB1C1Q8TD33 95 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms