RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 OR10V1Q8NGI7 309 aa12.62□□□□□ -0.39
U2AF1-210ENST00000478282 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
U2AF1-210ENST00000478282 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
U2AF1-210ENST00000478282 CBR3O75828 277 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 SRP14P37108 136 aaKnown RBP12.61□□□□□ -0.39
U2AF1-210ENST00000478282 DUSP3P51452 185 aaPredicted RBP12.61□□□□□ -0.39
U2AF1-210ENST00000478282 CASP6P55212 293 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 CARD18P57730 90 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 GNB2P62879 340 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 TESK1Q15569 626 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 STRADBQ9C0K7 418 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 SH2D2AQ9NP31 389 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 GYPAP02724 150 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 CYC1P08574 325 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 SSR4P51571 173 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 B3GALT5-AS1P59052 145 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 ZDHHC23Q8IYP9 409 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 GBGT1Q8N5D6 347 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 OR4F5Q8NH21 305 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 OR4F4Q96R69 305 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 SLC25A22Q9H936 323 aa12.61□□□□□ -0.39
U2AF1-210ENST00000478282 LOC102723996A0A087X1L8 192 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 CTXND1A0A1B0GTU2 59 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 A0A1B0GWJ7 208 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 HMGB3O15347 200 aaKnown RBP12.6□□□□□ -0.39
U2AF1-210ENST00000478282 CCL7P80098 99 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 HNF4GQ14541 408 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 ACSM6Q6P461 480 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 IFI44Q8TCB0 444 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 IGLV2-14P01704 120 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 ERVFC1-1P60608 527 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 PRSS8Q16651 343 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 PSMF1Q92530 271 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
U2AF1-210ENST00000478282 IGHV1-45A0A0A0MS14 117 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 CXCL13O43927 109 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 PLA2G5P39877 138 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 CNN1P51911 297 aaKnown RBP12.6□□□□□ -0.39
U2AF1-210ENST00000478282 GGNQ86UU5 652 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 TMEM9BQ9NQ34 198 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 OR1A1Q9P1Q5 309 aa12.6□□□□□ -0.39
U2AF1-210ENST00000478282 M0R143 59 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 DEGS1O15121 323 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 SYNGR1O43759 233 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 OR8G2PQ6IF36 304 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 LINC00596Q86U02 117 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
U2AF1-210ENST00000478282 GATAD1Q8WUU5 269 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 CBLN4Q9NTU7 201 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 ZNF585BQ52M93 769 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 TMEM14EPQ6UXP3 125 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 RDH5Q92781 318 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 FKBP11Q9NYL4 201 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 PPP1R3CQ9UQK1 317 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 KIR2DL5BA0A0G2JN68 375 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 KIR2DL5BA0A0G2JPC4 375 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 HS3ST1O14792 307 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 VENTXO95231 258 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 KIR2DL5AQ8N109 375 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
U2AF1-210ENST00000478282 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
U2AF1-210ENST00000478282 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 NPIPB11E5RHQ5 1161 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 G0S2P27469 103 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 MRPL21Q7Z2W9 205 aaKnown RBP12.58□□□□□ -0.4
U2AF1-210ENST00000478282 NCKAP5O14513 1909 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.58□□□□□ -0.4
U2AF1-210ENST00000478282 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.4
U2AF1-210ENST00000478282 LCN2P80188 198 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 NEIL1Q96FI4 390 aaPredicted RBP12.58□□□□□ -0.4
U2AF1-210ENST00000478282 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 WDR54Q9H977 334 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 POLR3KQ9Y2Y1 108 aaPredicted RBP12.58□□□□□ -0.4
U2AF1-210ENST00000478282 ARHGAP21Q5T5U3 1957 aa12.58□□□□□ -0.4
U2AF1-210ENST00000478282 MBP02144 154 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 COX5BP10606 129 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 COX6A1P12074 109 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 CCNOP22674 350 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 SRD5A2P31213 254 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 OR10G9Q8NGN4 311 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 OR10G7Q8NGN6 311 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 ZNF488Q96MN9 340 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 OTOGLQ3ZCN5 2332 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 CACNA1HO95180 2353 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 TMEM210A6NLX4 147 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 IFNL4K9M1U5 179 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 CLDN1O95832 211 aa12.57□□□□□ -0.4
U2AF1-210ENST00000478282 IL3RAP26951 378 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms