RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PRR30Q53SZ7 412 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 EIF5AL1Q6IS14 154 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF549Q6P9A3 640 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ARL9Q6T311 187 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 IGFL2Q6UWQ7 119 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 STAC2Q6ZMT1 411 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 GDPGP1Q6ZNW5 385 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 Q6ZRG5 221 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 Q71RC1 249 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SLC25A45Q8N413 288 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MMGT1Q8N4V1 131 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 COX18Q8N8Q8 333 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 OR5AR1Q8NGP9 310 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 OR2G3Q8NGZ4 309 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 OR1S1Q8NH92 325 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 C8orf46Q8TAG6 207 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 C11orf45Q8TAV5 145 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 CNIH3Q8TBE1 160 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 FBXO25Q8TCJ0 367 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 GPR148Q8TDV2 347 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MBD3L1Q8WWY6 194 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MRPS24Q96EL2 167 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ACY3Q96HD9 319 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PCED1BQ96HM7 432 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 GMPPAQ96IJ6 420 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SCGB3A2Q96PL1 93 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 DERL3Q96Q80 235 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 TRIB3Q96RU7 358 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PBDC1Q9BVG4 233 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 TMEM59Q9BXS4 323 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SPRY4Q9C004 299 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 OR8D2Q9GZM6 311 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 CHST6Q9GZX3 395 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PBOV1Q9GZY1 135 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 TMEM222Q9H0R3 208 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PRO1933Q9H354 126 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 POMKQ9H5K3 350 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF442Q9H7R0 627 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ACKR4Q9NPB9 350 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SDR39U1Q9NRG7 319 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 RNF186Q9NXI6 227 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 CISD1Q9NZ45 108 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 WRAP73Q9P2S5 460 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 IL36AQ9UHA7 158 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PCYOX1Q9UHG3 505 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 HIGD1AQ9Y241 93 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 UBIAD1Q9Y5Z9 338 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 A0A1B0GUL6 1792 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF646O15015 1829 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MYH13Q9UKX3 1938 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 SCN9AQ15858 1988 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 A0A087WXM4 84 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 TEX50A0A1B0GTY4 177 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 DUXBA0A1W2PPF3 345 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 hADV38S2A0JD32 116 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 SHISA9B4DS77 424 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 EEF1E1-BLOC1S5C9J1V9 151 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 D6RAR5 112 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 H0YJW9 148 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 H7C1C5 153 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 K7EMT4 169 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 M0R2Z0 102 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 EEF1E1O43324 174 aaKnown RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 BUB3O43684 328 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF432O94892 652 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 SLC2A10O95528 541 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 MAS1P04201 325 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 CSN2P05814 226 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 CD2P06729 351 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 H1F0P07305 194 aaKnown RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 ACP2P11117 423 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 ATF1P18846 271 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 TSPOP30536 169 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 ARL2P36404 184 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 CTRLP40313 264 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 GALR1P47211 349 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 RPL29P47914 159 aaKnown RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 MARCKSL1P49006 195 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 FABP6P51161 128 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 HNRNPA3P51991 378 aaKnown RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 DEFA1P59665 94 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 DEFA3P59666 94 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 GNG5P63218 68 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 FKBP3Q00688 224 aaKnown RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 MEF2BQ02080 365 aaPredicted RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 MEF2CQ06413 473 aaPredicted RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 LTBQ06643 244 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 LOXL1Q08397 574 aaPredicted RBP2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 LAMTOR4Q0VGL1 99 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 PSG7Q13046 419 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 FHL1Q13642 323 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 PEA15Q15121 130 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 DCAF12Q5T6F0 453 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 C9orf139Q6ZV77 190 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 PRSS48Q7RTY5 328 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF550Q7Z398 422 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 HOGA1Q86XE5 327 aa2.85□□□□□ -1.95
FNDC3B-209ENST00000478016 GKN2Q86XP6 184 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms