RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CD24P25063 80 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 DUSP1P28562 367 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 DEFA1P59665 94 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 DEFA3P59666 94 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 SCN1BQ07699 218 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 ZNF146Q15072 292 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 BAK1Q16611 211 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 DEFB136Q30KP8 78 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 PAN3Q58A45 887 aaKnown RBP7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 ATAD3CQ5T2N8 411 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 STEAP3Q658P3 488 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 TMEM200BQ69YZ2 307 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 SIGIRRQ6IA17 410 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 C6orf201Q7Z4U5 140 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 TRAPPC6BQ86SZ2 158 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 RTN4RL2Q86UN3 420 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 ZNF695Q8IW36 515 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 OR52I2Q8NH67 350 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 NEK7Q8TDX7 302 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 NUDCD2Q8WVJ2 157 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 LINC00476Q8WZB0 136 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 THAP7Q9BT49 309 aaPredicted RBP7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 PECRQ9BY49 303 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 IFT22Q9H7X7 185 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 C12orf4Q9NQ89 552 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 IFT46Q9NQC8 304 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 ZNF581Q9P0T4 197 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 NLKQ9UBE8 527 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 OR14J1Q9UGF5 321 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 HSF4Q9ULV5 492 aa7.64□□□□□ -1.19
SMARCB1-206ENST00000477836 OR2AT4A6NND4 320 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 SIRPB1O00241 398 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 SH2D1BO14796 132 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 DEGS1O15121 323 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 LY6G6CO95867 125 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 OR2H2O95918 312 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 RCVRNP35243 200 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 GDNFP39905 211 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 TMEM50BP56557 158 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 AP3S2P59780 193 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 RPL31P62899 125 aaKnown RBP7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 SSBP1Q04837 148 aaKnown RBP7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 RBM39Q14498 530 aaKnown RBP7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 ZNF57Q68EA5 555 aaPredicted RBP7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 LYSMD2Q8IV50 215 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 OR13D1Q8NGV5 346 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 SETD6Q8TBK2 473 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 GPX8Q8TED1 209 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 SULT4A1Q9BR01 284 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 SLC25A33Q9BSK2 321 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 DPCDQ9BVM2 203 aaPredicted RBP7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 TAS2R8Q9NYW2 309 aa7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 RBMX2Q9Y388 322 aaKnown RBP7.63□□□□□ -1.19
SMARCB1-206ENST00000477836 IGKV1D-17A0A075B6S4 117 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 TRAV24A0A0B4J272 114 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 LINC00854A0A1B0GVQ3 168 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 UBE2QL1A1L167 161 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 MEIS3P1A6NDR6 274 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 MCRIP1C9JLW8 97 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 SLC33A1O00400 549 aaPredicted RBP7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 SSX5O60225 188 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 RBBP9O75884 186 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 AMY1AP04745 511 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 AMY2AP04746 511 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 GLAP06280 429 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 CBX5P45973 191 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 IFITM3Q01628 133 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 RGS21Q2M5E4 152 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 ZNF626Q68DY1 528 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 Q6P435 159 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 TOMM5Q8N4H5 51 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 ASCC1Q8N9N2 400 aaKnown RBP7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 SUMF2Q8NBJ7 301 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 CMSS1Q9BQ75 279 aaKnown RBP7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 FAAP24Q9BTP7 215 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 CHMP1AQ9HD42 196 aaPredicted RBP7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 ETAA1Q9NY74 926 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 KLK11Q9UBX7 282 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 MTFP1Q9UDX5 166 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 AK3Q9UIJ7 227 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 ELF5Q9UKW6 265 aaPredicted RBP7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 KCNK7Q9Y2U2 307 aa7.62□□□□□ -1.19
SMARCB1-206ENST00000477836 PKHD1P08F94 4074 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 ANKRD20A5PA0PJZ0 165 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 RFPL4AA6NLU0 287 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 RFPL4AL1F8VTS6 287 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 LANCL1O43813 399 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 ORC5O43913 435 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 FCGR3AP08637 254 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 GSTT2BP0CG30 244 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 PSG2P11465 335 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 DTYMKP23919 212 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 PRDX2P32119 198 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 FAUP35544 74 aaKnown RBP7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 KCNJ3P48549 501 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 ASAH1Q13510 395 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 KLF9Q13886 244 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 ZNF273Q14593 569 aa7.61□□□□□ -1.19
SMARCB1-206ENST00000477836 ATXN7L3Q14CW9 347 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms