RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SCRG1O75711 98 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 FBXO45P0C2W1 286 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 OMGP23515 440 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 IL12BP29460 328 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 ARL3P36405 182 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 PPP1CBP62140 327 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 SPATA25Q9BR10 227 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 HINT2Q9BX68 163 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 PKIBQ9C010 78 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 BANF2Q9H503 90 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 ZDBF2Q9HCK1 2354 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 ADAMTS20P59510 1910 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 IGLV3-12A0A075B6K2 115 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 TRAV9-2A0A087WT02 112 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A087WV48 116 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 TRAV8-6A0A0B4J262 113 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 PRR32B1ATL7 298 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 ST8SIA3O43173 380 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 UTS2O95399 124 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 DUSP1P28562 367 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 LHX2P50458 406 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 ZP4Q12836 540 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 CD226Q15762 336 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 SLC18B1Q6NT16 456 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 LINC00114Q6XXX2 140 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 ASCC3Q8N3C0 2202 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 COL5A1P20908 1838 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-207ENST00000477573 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 WIPF3A6NGB9 483 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 ZFP92A6NM28 416 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 PNMTP11086 282 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 HIST1H1CP16403 213 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 CCKBRP32239 447 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 SRSF7Q16629 238 aaKnown RBP eCLIP10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 MPV17L2Q567V2 206 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 STUMQ69YW2 141 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 SLC23A3Q6PIS1 610 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 ERASQ7Z444 233 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 BAGE3Q86Y29 109 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 BAGE2Q86Y30 109 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 PLPP7Q8NBV4 271 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 OR5H2Q8NGV7 314 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 OR10AC1Q8NH08 325 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 OR2AE1Q8NHA4 323 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 MBD3L1Q8WWY6 194 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 TECTAO75443 2155 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 TRAV27A0A087WT01 109 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 A0A1W2PR80 420 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 GAGE12HA6NDE8 117 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 LRRC3CA6NJW4 275 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 GPM6AP51674 278 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 PLCXD2Q0VAA5 305 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 C1QL3Q5VWW1 255 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF787Q6DD87 383 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 INO80CQ6PI98 192 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 OR51A4Q8NGJ6 313 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 ATP5SQ99766 215 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 ZDHHC11Q9H8X9 412 aa10.83□□□□□ -0.68
RTFDC1-207ENST00000477573 TRAV9-1A0A075B6T8 112 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 P2RY10O00398 339 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 SH2D1BO14796 132 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 S1PR2O95136 353 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 NRASP01111 189 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 KRASP01116 189 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 PI3P19957 117 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 RRADP55042 308 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 RUNX1Q01196 453 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 FNDC7Q5VTL7 733 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 OR6K6Q8NGW6 343 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 RAB1CQ92928 201 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 LIN37Q96GY3 246 aaPredicted RBP10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 C4orf45Q96LM5 186 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 METTL7AQ9H8H3 244 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 NPVFQ9HCQ7 196 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 WASHC3Q9Y3C0 194 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 FER1L5A0AVI2 2057 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 ADAMTS9Q9P2N4 1935 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 A0A1W2PQD3 144 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 GRIFINA4D1Z8 144 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 J3QR89 54 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 ARPC3O15145 178 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 HPNP05981 417 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 NGFRP08138 427 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 FTH1P19P0C7X4 201 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 IGFBP3P17936 291 aaPredicted RBP10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 OPRM1P35372 400 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF83P51522 516 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 RHOBP62745 196 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 IL11RAQ14626 422 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 OR2C3Q8N628 320 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 OR10V1Q8NGI7 309 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 MRPL24Q96A35 216 aaKnown RBP10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 DNAJA3Q96EY1 480 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 TM2D1Q9BX74 207 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 MRPL16Q9NX20 251 aaKnown RBP10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 RNF114Q9Y508 228 aa10.82□□□□□ -0.68
RTFDC1-207ENST00000477573 VCANP13611 3396 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms