RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 R4GN57 208 aa11.49□□□□□ -0.57
HLA-DMA-208ENST00000477541 CCDC163A0A0D9SF12 145 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 ANKRD30BLA7E2S9 258 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 KLF7O75840 302 aaPredicted RBP11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 PRSS12P56730 875 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 ARL16Q0P5N6 197 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 Q6ZRM9 215 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 BEND4Q6ZU67 534 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 SSX7Q7RTT5 188 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 CIB3Q96Q77 187 aaPredicted RBP11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 PRO1933Q9H354 126 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 OR6C3Q9NZP0 311 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 HSPB7Q9UBY9 170 aa11.48□□□□□ -0.57
HLA-DMA-208ENST00000477541 MED12Q93074 2177 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 TRAV24A0A0B4J272 114 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 J3QW42 95 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 MRPL33O75394 65 aaKnown RBP11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 NXPH3O95157 252 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 SYNGR4O95473 234 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 IAPPP10997 89 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 COX5AP20674 150 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 FOLR3P41439 243 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 YRDCQ86U90 279 aaKnown RBP11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 DDA1Q9BW61 102 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 PARLQ9H300 379 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 OCIAD1Q9NX40 245 aa11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 ANKRD11Q6UB99 2663 aaPredicted RBP11.47□□□□□ -0.57
HLA-DMA-208ENST00000477541 B4E171 279 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 J3QT63 122 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 PDE6DO43924 150 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 TSPAN7P41732 249 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 IDH3GP51553 393 aaPredicted RBP11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 TNFRSF9Q07011 255 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 TESK1Q15569 626 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 ZNF124Q15973 351 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 VWC2Q2TAL6 325 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 ZNF664Q8N3J9 261 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 DIRC2Q96SL1 478 aa11.46□□□□□ -0.57
HLA-DMA-208ENST00000477541 UBE2L5PA0A1B0GUS4 154 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 G3V3Y1 287 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 TMPRSS2O15393 492 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 IGLV2-14P01704 120 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 RNF224P0DH78 156 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 GFRA1P56159 465 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 ARF1P84077 181 aaKnown RBP11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF585BQ52M93 769 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 SPANXN5Q5MJ07 72 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF468Q5VIY5 522 aaPredicted RBP11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF497Q6ZNH5 498 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 SAP25Q8TEE9 199 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 GPHA2Q96T91 129 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 NEU1Q99519 415 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 WIPI2Q9Y4P8 454 aa11.46□□□□□ -0.58
HLA-DMA-208ENST00000477541 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 F6UZH7 168 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 SYNGR1O43759 233 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 GYPAP02724 150 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 SELLP14151 372 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 PLP2Q04941 152 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 C20orf204Q6ZNR8 217 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR10G9Q8NGN4 311 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR10G7Q8NGN6 311 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 RAB1CQ92928 201 aa11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 AKIRIN1Q9H9L7 192 aaPredicted RBP11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
HLA-DMA-208ENST00000477541 GPR179Q6PRD1 2367 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 CACNA1EQ15878 2313 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 C5orf49A4QMS7 147 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 SLC33A1O00400 549 aaPredicted RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 ATXN7O15265 892 aaPredicted RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 MLNRO43193 412 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 CLDN1O95832 211 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 P0C879 139 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 NDUFB7P17568 137 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 CNN1P51911 297 aaKnown RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 CDCP2Q5VXM1 449 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 Q6P435 159 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 GBGT1Q8N5D6 347 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF709Q8N972 641 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 POM121L2Q96KW2 1035 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 IL36RNQ9UBH0 155 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 BOKQ9UMX3 212 aaPredicted RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 POLDIP2Q9Y2S7 368 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 CABIN1Q9Y6J0 2220 aa11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 FASNP49327 2511 aaKnown RBP11.44□□□□□ -0.58
HLA-DMA-208ENST00000477541 M0QZK8 103 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 HSPB6O14558 160 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms