RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 LIN54Q6MZP7 749 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 IZUMO2Q6UXV1 221 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 FAM89BQ8N5H3 189 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 RNF152Q8N8N0 203 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 EDARADDQ8WWZ3 215 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 ACOT13Q9NPJ3 140 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 K7EIL1 84 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 HLA-DRB1P01911 266 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 GSTP1P09211 210 aaKnown RBP12.32□□□□□ -0.44
CLDN11-204ENST00000477531 ZBTB25P24278 435 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 CEACAM6P40199 344 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 VEGFCP49767 419 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 MRPS15P82914 257 aaKnown RBP12.32□□□□□ -0.44
CLDN11-204ENST00000477531 DCTN2Q13561 401 aaKnown RBP12.32□□□□□ -0.44
CLDN11-204ENST00000477531 PLGLAQ15195 96 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 C5orf64Q2M2E5 130 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 OR56B1Q8NGI3 324 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 OR5M8Q8NGP6 311 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 FAM3DQ96BQ1 224 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 CMSS1Q9BQ75 279 aaKnown RBP12.32□□□□□ -0.44
CLDN11-204ENST00000477531 IFI27L2Q9H2X8 130 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 OR51J1Q9H342 316 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 PARP11Q9NR21 331 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 V9GY05 133 aa12.32□□□□□ -0.44
CLDN11-204ENST00000477531 WI2-2373I1.2A0A1W2PRP0 233 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 H7C2Y5 167 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 ITGB1BP1O14713 200 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 MC5RP33032 325 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 MAP2K4P45985 399 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 HLA-DRB3P79483 266 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 CFHR3Q02985 330 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 ZNF367Q7RTV3 350 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 C4orf3Q8WVX3 66 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
CLDN11-204ENST00000477531 CNBD2Q96M20 576 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
CLDN11-204ENST00000477531 PDCD5O14737 125 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 DENRO43583 198 aaKnown RBP12.3□□□□□ -0.44
CLDN11-204ENST00000477531 CNTFRP26992 372 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 PSMB8P28062 276 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 CLDN12P56749 244 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 FABP5Q01469 135 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 DEFB136Q30KP8 78 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 NPBQ8NG41 125 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 ABHD14BQ96IU4 210 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 RITA1Q96K30 269 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 GFI1Q99684 422 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-204ENST00000477531 PECRQ9BY49 303 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 Q9N2K0 584 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 ZNF221Q9UK13 617 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 RAB26Q9ULW5 256 aa12.3□□□□□ -0.44
CLDN11-204ENST00000477531 TRAV41A0A0B4J266 112 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 ATP6V0E1O15342 81 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 RAMP3O60896 148 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 RBBP9O75884 186 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 CD3GP09693 182 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 CT45A6P0DMU7 189 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 CT45A5P0DMU8 189 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 CT45A7P0DMV0 189 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 MYL9P24844 172 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 TMEM50BP56557 158 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 DGCR2P98153 550 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 TBCEQ15813 527 aaPredicted RBP12.29□□□□□ -0.44
CLDN11-204ENST00000477531 C9orf66Q5T8R8 295 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
CLDN11-204ENST00000477531 C11orf54Q9H0W9 315 aaPredicted RBP12.29□□□□□ -0.44
CLDN11-204ENST00000477531 Q9H521 79 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
CLDN11-204ENST00000477531 IGHV7-81A0A0B4J1V7 117 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 RRHO14718 337 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 NDUFA3O95167 84 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 SCTP09683 121 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 GADD45AP24522 165 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
CLDN11-204ENST00000477531 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-204ENST00000477531 HES5Q5TA89 166 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 GLDNQ6ZMI3 551 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-204ENST00000477531 ABHD5Q8WTS1 349 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 RNF5Q99942 180 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 OR1A1Q9P1Q5 309 aa12.28□□□□□ -0.44
CLDN11-204ENST00000477531 TRAV1-2A0A0B4J238 106 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms