RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SELENOHQ8IZQ5 122 aaKnown RBP9.41□□□□□ -0.9
COL27A1-204ENST00000477421 UBAC2Q8NBM4 344 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 BSCL2Q96G97 398 aaPredicted RBP9.41□□□□□ -0.9
COL27A1-204ENST00000477421 TCEAL7Q9BRU2 100 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 SAMD10Q9BYL1 202 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 H0YL77 283 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 CDK2AP1O14519 115 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 GAPDHP04406 335 aaKnown RBP9.41□□□□□ -0.9
COL27A1-204ENST00000477421 ANOS1P23352 680 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 REG1BP48304 166 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 DLK1P80370 383 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF880Q6PDB4 577 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 CACFD1Q9UGQ2 172 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
COL27A1-204ENST00000477421 TLN1Q9Y490 2541 aaKnown RBP9.41□□□□□ -0.9
COL27A1-204ENST00000477421 OOEPA6NGQ2 149 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 PRDX2P32119 198 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 NTF4P34130 210 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 TM4SF20Q53R12 229 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 STUMQ69YW2 141 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 VKORC1L1Q8N0U8 176 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 RAB39BQ96DA2 213 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 C1QTNF5Q9BXJ0 243 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 FBLN5Q9UBX5 448 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.9
COL27A1-204ENST00000477421 LILRA1O75019 489 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 CLDN14O95500 239 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 MMP9P14780 707 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 CTSSP25774 331 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 OR5P3Q8WZ94 311 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 OR2V2Q96R30 315 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 ABHD14AQ9BUJ0 271 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 NUP210Q8TEM1 1887 aaPredicted RBP9.4□□□□□ -0.9
COL27A1-204ENST00000477421 IGF2RP11717 2491 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 IGSF23A1L1A6 192 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 CRYABP02511 175 aaKnown RBP9.4□□□□□ -0.9
COL27A1-204ENST00000477421 PSG7Q13046 419 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 BATFQ16520 125 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 BTNL8Q6UX41 500 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 ZNRF1Q8ND25 227 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 OR51I2Q9H344 312 aa9.4□□□□□ -0.9
COL27A1-204ENST00000477421 A0A1B0GU03 582 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 CNIH1O95406 144 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 ABLIM2Q6H8Q1 611 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 POM121L2Q96KW2 1035 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 HS3ST6Q96QI5 342 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 DOK5Q9P104 306 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 A0A1W2PRD5 423 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 A0A1W2PRF3 423 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 A0A1W2PRM7 423 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 RRP8O43159 456 aaKnown RBP9.39□□□□□ -0.91
COL27A1-204ENST00000477421 TOX4O94842 621 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 SCGB1D1O95968 90 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 MRPS11P82912 194 aaKnown RBP9.39□□□□□ -0.91
COL27A1-204ENST00000477421 CSRP2Q16527 193 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 RTL8BQ17RB0 113 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A27PA6NNH2 459 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 TMEM11P17152 192 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 DRAM1Q8N682 238 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 OR4C12Q96R67 309 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 GLRX2Q9NS18 164 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 WIPF3A6NGB9 483 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 G3V3Q6 166 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 H0Y980 276 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 SMAD7O15105 426 aaKnown RBP9.39□□□□□ -0.91
COL27A1-204ENST00000477421 DEFA4P12838 97 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 TMEM108Q6UXF1 575 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 ITLN1Q8WWA0 313 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 CCL13Q99616 98 aa9.39□□□□□ -0.91
COL27A1-204ENST00000477421 LTBP2Q14767 1821 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ATRXP46100 2492 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF320A2RRD8 509 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 CLDN34H7C241 214 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 PAGE4O60829 102 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 CD59P13987 128 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 EIF2S3P41091 472 aaKnown RBP9.38□□□□□ -0.91
COL27A1-204ENST00000477421 TNFSF10P50591 281 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 PROK2Q9HC23 129 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ALPK3Q96L96 1907 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 CA11O75493 328 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 FABP4P15090 132 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 RAB5AP20339 215 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 MPV17P39210 176 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 CDC34P49427 236 aaPredicted RBP9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ODF1Q14990 250 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 HIST3H3Q16695 136 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF66Q6ZN08 573 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 BOD1Q96IK1 185 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 WIPI2Q9Y4P8 454 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 MBP02144 154 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 TNFRSF1AP19438 455 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 GZMHP20718 246 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 HOXA6P31267 233 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 RND3P61587 244 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms